DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15221 and sv2c

DIOPT Version :10

Sequence 1:NP_001096957.1 Gene:CG15221 / 32127 FlyBaseID:FBgn0030331 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_002934873.1 Gene:sv2c / 100490137 XenbaseID:XB-GENE-960877 Length:725 Species:Xenopus tropicalis


Alignment Length:620 Identity:138/620 - (22%)
Similarity:249/620 - (40%) Gaps:127/620 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 REFANMEGGREENLSEKPRPHTFEEAITLTGVGRFHYKLLLICGLCFMGVMVEIMGVSLIMNQMK 76
            ||........||.|:::     :|..|...|.|||.:.|..:.|:..|...||:..|..::...:
 Frog   119 RELETERKADEEELAQQ-----YELIIQECGHGRFQWTLFFVLGMALMADGVEVFVVGFVLPSAE 178

  Fly    77 CDLQPTLNQQGILASAGFLGVVLSSHAMGFLADTWGRATTLRYALCISSVCSIVSAFSVNIWMLI 141
            .|:....:..|.|.|..:||:::.:...|.|||..||..:|...:.::...:.:|:|.....:.:
 Frog   179 TDMCIPDSGSGWLGSIVYLGMMVGAFFWGGLADKVGRKQSLLICMSVNGFFAFLSSFVQGYGLFL 243

  Fly   142 VFRFLTGFFISGGQACVFSLCGEFHGTGSRIRHVTLLSGFLCMAMIFAPAMAIGILPLRIETIVL 206
            |.|.|:||.|.|.....||...|......|..|::.|..|..:..|:|.|||..|:|....:..:
 Frog   244 VCRLLSGFGIGGALPTAFSYFSEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWSFSM 308

  Fly   207 G--MHFSSWRVLLLANVSIPLL-ALVGISALPETPKYLLVQGRGDESLEVLRSIFANN---SGRD 265
            |  ..|.||||.::. .::|.: |:|.::.:||:|::||..|:.||:..:|:.|...|   .|..
 Frog   309 GSAYQFHSWRVFVIV-CALPCVSAVVALTFMPESPRFLLETGKHDEAWMILKQIHDTNMRARGEP 372

  Fly   266 PSEYPVKEVALESGGVSLSDVHGFLDAVRLVWHQTVPLFYRAR-----LW-------------HT 312
            ...:.|:.:........|.::    ::....|::.  .|.|.|     :|             :|
 Frog   373 EKVFTVQRIKTPKQIDELIEI----ESDTGTWYKR--CFVRIRTEFYGIWLTFMRCFEYPVKDNT 431

  Fly   313 LNICCIQFIIYFLAQGIFMWFPTIL-----DELGTR----NGE---------------------- 346
            :.:..:...:.|...|:.:||..::     ||..:|    ||.                      
 Frog   432 IKLTIVWLTLSFGYYGLSVWFSDVIKHLQADEYASRVKRFNGSTIADYKFNYTLENQIHKNAVFI 496

  Fly   347 ------------------------------NTLL--CTVLQGFNINSS------SEDEASSCSVE 373
                                          ||..  ||::....:|:.      ::.:..:|:..
 Frog   497 NDRFISMKFKSVVFQDSLFERCYFEDVTSINTYFRNCTLIDTHFVNTDLEKYKFTDSQTINCTFT 561

  Fly   374 V-----------DTSTYQVMII-IAACFVVI--YLIFAYIIDYMGKKNLLMAWMVLTMICLVALH 424
            :           |.|.|.:..: ......|:  .::.|.::|.:|:..:|...|||:.|....|.
 Frog   562 IPKIGCQITFDDDYSAYWIYFVNFLGTLAVLPGNIVSALLMDKIGRLTMLGGSMVLSGISCFLLW 626

  Fly   425 YVEQFALVVIALTVVMAIG-NCGGLVSTIAMEFYPTHINAMGMCFIMMVGRLGAVVGSNILGRLL 488
            :....:::|..|.|...:. :....:..:.:|.|||...|.|..|:..:.:..||:|:.|.|.|:
 Frog   627 FGTSESMMVGMLCVYNGLTISAWNSLDVVTVELYPTDKRATGFGFLNALCKGAAVLGNLIFGSLV 691

  Fly   489 -FASCDPIFWALLALVVLL--CTLGYFLPEKARSQ 520
             .....||   |||..||:  ..:|..||: .|:|
 Frog   692 GITKAIPI---LLASAVLVGGGLVGLRLPD-TRNQ 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15221NP_001096957.1 2A0119 <85..479 CDD:273328 103/501 (21%)
sv2cXP_002934873.1 synapt_SV2 1..725 CDD:130366 138/620 (22%)

Return to query results.
Submit another query.