DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15221 and sv2ba

DIOPT Version :9

Sequence 1:NP_001096957.1 Gene:CG15221 / 32127 FlyBaseID:FBgn0030331 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001076464.1 Gene:sv2ba / 100009626 ZFINID:ZDB-GENE-070209-134 Length:689 Species:Danio rerio


Alignment Length:615 Identity:136/615 - (22%)
Similarity:229/615 - (37%) Gaps:120/615 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 REFANMEGGREENLSEKPRPHTFEEAITLTGVGRFHYKLLLICGLCFMGVMVEIMGVSLIMNQMK 76
            |..|.|:......:.|:..|..:|..:...|.|||.:.|..:.||..|...||...||..:...:
Zfish    77 RREARMKARMAAEVEEETLPDQYESIMEDCGHGRFQWTLFTLLGLALMADGVECFVVSFALPSAE 141

  Fly    77 CDLQPTLNQQGILASAGFLGVVLSSHAMGFLADTWGRATTLRYALCISSVCSIVSAFSVNIWMLI 141
            .|:..:...:|:|....::|:::.:...|.|||..||...|.|||.|:.:.|.:|.|:......|
Zfish   142 KDMCLSNADKGMLGLIVYVGMMIGAVVWGGLADKLGRKQCLLYALAINCIFSFLSCFAQGYGFFI 206

  Fly   142 VFRFLTGFFISGGQACVFSLCGEFHGTGSRIRHVTLLSGFLCMAMIFAPAMAIGILPLRIETIVL 206
            .||..:|..|.|....|::...||.....|..|::.|..|..:..::|...|.||:|.......:
Zfish   207 FFRLCSGIGIGGSIPVVYTYYAEFLQMDKRGEHLSWLCLFWMLGGLYASFTAWGIIPHYGWGFSM 271

  Fly   207 G--MHFSSWRVLLLANVSIPLLALVGISALPETPKYLLVQGRGDESLEVLRSIFANNSGR--DPS 267
            |  ..|.||||.:|......:.||.|:..:||:|::||...|.||:..:||.:...|.|.  :|.
Zfish   272 GTEFQFHSWRVFVLVCFLPSVAALAGLVFMPESPRFLLESARHDEAWMILRRVHDTNWGAKGEPE 336

  Fly   268 EY----PVK----------EVALESGGVSLSDVHGFLDAVRLVWHQTVPLFYRARLWHTLNICCI 318
            ..    .:|          |:..|:|......:...:..|:.|....:.|.......|.|.|..:
Zfish   337 RVFQVSQIKTPQTQDDEFIEIQSETGTAFQRFMVRQMTLVKQVMKNMLSLAAPDVRLHGLFIAIV 401

  Fly   319 QFIIYFLAQGIFMWFP------------------------------TILDELGTRNGEN------ 347
            .|.:.|...|:..|||                              |:.::| .:.||.      
Zfish   402 WFTMAFSYYGLGTWFPDQIKYLQFEEYESNVKIFHRERVERFHFNFTLQNQL-HKEGEYVHDRFI 465

  Fly   348 --------------------------------TLLCTVLQGFNINSSSEDEASSCSVEVDTSTYQ 380
                                            ||..||.  :|.:...:.:..:|::|..|..:.
Zfish   466 NIEIRNVKFEDSLFENCYFEDIKSTETFFENCTLKNTVF--YNTDLWEDSKFINCNLENTTFLHP 528

  Fly   381 VMIIIAACF--------VVIYL--------------IFAYIIDYMGKKNLLMAWMVLTMIC-LVA 422
            .    ..|.        ::|||              :...::|.:|:..::...|:.:.:| ...
Zfish   529 K----KGCHLNFQEENDILIYLDSFLGSLSVIPGNILAGLLMDKIGRLKIIGGSMLGSAVCTFFL 589

  Fly   423 LHYVEQFALVVIALTVVMAIGNCGGLVSTIAMEFYPTHINAMGMCFIMMVGRLGAVVGSNILGRL 487
            |....|:|:|:.......|.......:..:.:|.||....|.....:....:|.|::.|.|.|: 
Zfish   590 LLCFSQWAVVLFQCLFFAAGAAAWNGIEVVTVELYPASKRATAFGVLNGTCKLAAIISSFIFGK- 653

  Fly   488 LFASCDPIFWALLALVVLLC--TLGYFLPE 515
             |.....|...:|:...|:|  .|.:.|||
Zfish   654 -FIGITKIIPIILSFSALVCGGLLAFKLPE 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15221NP_001096957.1 2A0115 36..488 CDD:273327 121/560 (22%)
MFS 51..488 CDD:119392 116/545 (21%)
sv2baNP_001076464.1 synapt_SV2 36..689 CDD:130366 136/615 (22%)
MFS 116..678 CDD:119392 122/570 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208328at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.