DRSC/TRiP Functional Genomics Resources

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Protein Alignment prtp and PDIL1-3

DIOPT Version :9

Sequence 1:NP_001188583.1 Gene:prtp / 32124 FlyBaseID:FBgn0030329 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_191056.2 Gene:PDIL1-3 / 824661 AraportID:AT3G54960 Length:579 Species:Arabidopsis thaliana


Alignment Length:488 Identity:100/488 - (20%)
Similarity:183/488 - (37%) Gaps:138/488 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 QEEDTGKQDKQFTVELDPETFDTAIAGGNVF--VKFFAPWCGHCKRIQPLWEQLA-EIMNVDNPK 88
            :||.....|::....|..:.| |...|.|.|  |:|:|||||.|:.:.|.:...| |:..:    
plant    89 EEEPLPPVDEKDVAVLTKDNF-TEFVGNNSFAMVEFYAPWCGACQALTPEYAAAATELKGL---- 148

  Fly    89 VIIAKVDCTKHQGLCATHQVTGYPTLRLFKLGEEESVKFKGTRDLPAITDFINKE-------LSA 146
            ..:||:|.|:...|...:::.|:||:.||..||.... ::|.|....|..::.|:       ::.
plant   149 AALAKIDATEEGDLAQKYEIQGFPTVFLFVDGEMRKT-YEGERTKDGIVTWLKKKASPSIHNITT 212

  Fly   147 PAEAD-----------------LGEVKRE--------------QVENLNIGKVVDL--------- 171
            ..||:                 :|....|              |..:.:|.|:.::         
plant   213 KEEAERVLSAEPKLVFGFLNSLVGSESEELAAASRLEDDLSFYQTASPDIAKLFEIETQVKRPAL 277

  Fly   172 -----------------TEDTFAKHVSTG----------------------NHFVKFFAPWCSHC 197
                             |:...|:.||..                      |..:.|..  .:..
plant   278 VLLKKEEEKLARFDGNFTKTAIAEFVSANKVPLVINFTREGASLIFESSVKNQLILFAK--ANES 340

  Fly   198 QRLAPTWEDLAKELIKEPTVTISKIDCTQF-RSICQDFEVKG-YPTLLWIEDGKKIEKY--SGAR 258
            ::..||..::||....:......::|...: .::...|.|.| .|.:|.....:.:.|:  .|..
plant   341 EKHLPTLREVAKSFKGKFVFVYVQMDNEDYGEAVSGFFGVTGAAPKVLVYTGNEDMRKFILDGEL 405

  Fly   259 DLSTLKTYVEKMVG---VPLEKT----AGEAGDEKVVIEEVAGEEDAAKKLTPQQLTGEDEFDQA 316
            .::.:||..|..:.   .|..|:    ....||.||::                    .:.||:.
plant   406 TVNNIKTLAEDFLADKLKPFYKSDPLPENNDGDVKVIV--------------------GNNFDEI 450

  Fly   317 IAEGV--AFIKFYAPWCGHCQKLQPTWEQLATETHQAQSSVKIAKVDCTAPENKQVCIDQQVEGY 379
            :.:..  ..::.|||||||||..:|.:.:|........|.| :||:|.|:.|:.:.    :.:|:
plant   451 VLDESKDVLLEIYAPWCGHCQSFEPIYNKLGKYLKGIDSLV-VAKMDGTSNEHPRA----KADGF 510

  Fly   380 PTLFLYKNGQRQNE---YEGSRSLPELQAYLKK 409
            ||:..:..|.:..:   .:..|::.||..:|||
plant   511 PTILFFPGGNKSFDPIAVDVDRTVVELYKFLKK 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prtpNP_001188583.1 PDI_a_ERp46 38..140 CDD:239303 32/104 (31%)
ER_PDI_fam 39..409 CDD:273457 95/474 (20%)
PDI_a_ERp46 167..267 CDD:239303 21/151 (14%)
PDI_a_ERp46 303..407 CDD:239303 27/108 (25%)
PDIL1-3NP_191056.2 ER_PDI_fam 99..553 CDD:273457 97/478 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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