DRSC/TRiP Functional Genomics Resources

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Protein Alignment prtp and pdia6

DIOPT Version :10

Sequence 1:NP_572742.1 Gene:prtp / 32124 FlyBaseID:FBgn0030329 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001007974.1 Gene:pdia6 / 493341 XenbaseID:XB-GENE-974680 Length:441 Species:Xenopus tropicalis


Alignment Length:284 Identity:57/284 - (20%)
Similarity:107/284 - (37%) Gaps:91/284 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 LEEVNNYIDILMKALHDENLLECVNLVIVSDHGMQALNNSIEVETIVNMDGLVLSKGV-----VA 315
            :.:.|.|:..|.|.:..:.|.:     :.|.:| :.:.:.|.|:.:..     :|:||     ..
 Frog   129 IRDANLYVSGLPKTMTQKELEQ-----LFSQYG-RIITSRILVDQVTG-----VSRGVGFIRFDK 182

  Fly   316 RIHLNETDRSIDEVAGEIRCKIDG----VKVNTINDIPLRK---------HYSKSKRVGDIIIEG 367
            ||   |.:.:|..:.|:   |..|    :.|...|: |.:|         :.|.::|.       
 Frog   183 RI---EAEEAIKGLNGQ---KPSGATEPITVKFANN-PSQKSSQALLSQLYQSPNRRY------- 233

  Fly   368 KPGTSFYKSE----TNLGDHGYDYHN------ENMHTVMFARGPS--------FLQNVTVPSFQN 414
             ||...::::    .||.:..|....      :.|.:::....|.        |:.|::..|.::
 Frog   234 -PGPLHHQAQRFRLDNLLNMAYGVKRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSPDSDES 297

  Fly   415 VQYMNLWLYLLGLEGTVDNNGTIGFFDSILKNPPIRENKWDSMEECLNFGSAEVLQCDKA----- 474
            |    || .|.|..|.|:|...|..|::         ||      |..||...:...|:|     
 Frog   298 V----LW-QLFGPFGAVNNVKVIRDFNT---------NK------CKGFGFVTMTNYDEAAMAIA 342

  Fly   475 --EGHDL--KKLSLHLENCKEHQN 494
              .|:.|  :.|.:..:..|.|::
 Frog   343 SLNGYRLGDRVLQVSFKTNKAHKS 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prtpNP_572742.1 PDI_a_ERp46 38..140 CDD:239303
PDI_a_ERp46 167..267 CDD:239303 2/10 (20%)
PDI_a_ERp46 303..407 CDD:239303 24/139 (17%)
pdia6NP_001007974.1 PDI_a_P5 26..128 CDD:239299
PDI_a_P5 162..267 CDD:239299 23/124 (19%)
P5_C 276..405 CDD:239281 26/111 (23%)
Blue background indicates that the domain is not in the aligned region.

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