DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prtp and PDIA3

DIOPT Version :9

Sequence 1:NP_001188583.1 Gene:prtp / 32124 FlyBaseID:FBgn0030329 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_005304.3 Gene:PDIA3 / 2923 HGNCID:4606 Length:505 Species:Homo sapiens


Alignment Length:509 Identity:128/509 - (25%)
Similarity:206/509 - (40%) Gaps:145/509 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLLSP----LLPITRASQEEDTGKQDKQFTVELDPETFDTAI----AGGNVFVKFFAPWCGHCKR 70
            |.|.|    ||...|.:...|        .:||..:.|::.|    :.|.:.|:|||||||||||
Human     6 LALFPGVALLLAAARLAAASD--------VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKR 62

  Fly    71 IQPLWEQLAEIMNVDNPKVIIAKVDCTKHQGLCATHQVTGYPTLRLFKLGEEESVKFKGTRDLPA 135
            :.|.:|..|..:....|   :||||||.:...|..:.|:|||||::|:.|||... :.|.|....
Human    63 LAPEYEAAATRLKGIVP---LAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGA-YDGPRTADG 123

  Fly   136 ITDFINKELSAPAEADLGEVKREQVENLNIGK---VVDLTEDTFAKHVSTGNHFVK--------- 188
            |...:.|: :.||...|.  ..|:.:.....|   :|...:|:|::   ..:.|:|         
Human   124 IVSHLKKQ-AGPASVPLR--TEEEFKKFISDKDASIVGFFDDSFSE---AHSEFLKAASNLRDNY 182

  Fly   189 ----------------------FFAPWCSHCQRLAPTWEDLA-------------KELIKE---- 214
                                  .|.|  ||   |...:||..             |:.|:|    
Human   183 RFAHTNVESLVNEYDDNGEGIILFRP--SH---LTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG 242

  Fly   215 --PTVTISKIDCTQFRSIC-----QDFEVKGYPTLLW-----------IEDGKKIEKYSGARDLS 261
              |.:|....|..|.:.:.     .|:|.....:..|           ::.|.|:.....:|   
Human   243 ICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASR--- 304

  Fly   262 TLKTYVEKMVGVPLEKTAGE---------AGDEKVVIEEVAGEEDAAKKLT-------------- 303
              ||:..::....||.||||         .|::.|:.||.:.:..|.::..              
Human   305 --KTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKS 367

  Fly   304 ---------PQQLTGEDEFDQAI--AEGVAFIKFYAPWCGHCQKLQPTWEQLATETHQAQSSVKI 357
                     |.::...:.||:.:  ......|:|||||||||:.|:|.:::|. |......::.|
Human   368 EPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELG-EKLSKDPNIVI 431

  Fly   358 AKVDCTAPENKQVCIDQQVEGYPTLFLYKNGQRQN--EYEGSRSLPELQAYLKK 409
            ||:|.||   ..|....:|.|:||::.....::.|  :|||.|.|.:..:||::
Human   432 AKMDATA---NDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQR 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prtpNP_001188583.1 PDI_a_ERp46 38..140 CDD:239303 41/105 (39%)
ER_PDI_fam 39..409 CDD:273457 121/478 (25%)
PDI_a_ERp46 167..267 CDD:239303 28/168 (17%)
PDI_a_ERp46 303..407 CDD:239303 34/130 (26%)
PDIA3NP_005304.3 YbbN 25..487 CDD:331940 122/490 (25%)
ER retention motif 502..505
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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