DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment prtp and PDILT

DIOPT Version :9

Sequence 1:NP_001188583.1 Gene:prtp / 32124 FlyBaseID:FBgn0030329 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_777584.1 Gene:PDILT / 204474 HGNCID:27338 Length:584 Species:Homo sapiens


Alignment Length:439 Identity:95/439 - (21%)
Similarity:172/439 - (39%) Gaps:99/439 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KRIQPLWEQL---AEIMNVDNPKVIIAKVDCTKHQGLCATHQVTGYPTLRLFKLG-EEESVKFKG 129
            |:.:.|.|:|   .|||......:...|||.|..:.|.....:|..|.|:||..| ..|.:..||
Human    73 KQSRNLAEELGKAVEIMGKGKNGIGFGKVDITIEKELQQEFGITKAPELKLFFEGNRSEPISCKG 137

  Fly   130 TRDLPAITDFINKELSAPA-----EADLGE--VKR------------EQVENLNIGKVVDLTEDT 175
            ..:..|:..::.:::|..|     ...:.|  :.|            |:|..|....:.|..|.|
Human   138 VVESAALVVWLRRQISQKAFLFNSSEQVAEFVISRPLVIVGFFQDLEEEVAELFYDVIKDFPELT 202

  Fly   176 FAKHVSTGNHFVKFFAPWCS----------HCQRL---APTWEDLAKELIKEPTVTISKIDCTQF 227
            |.. ::.||...:|.....|          :.|:|   :...::|.:.:.:..|..:.:.: |:.
Human   203 FGV-ITIGNVIGRFHVTLDSVLVFKKGKIVNRQKLINDSTNKQELNRVIKQHLTDFVIEYN-TEN 265

  Fly   228 RSICQDFEVKGYPTLLWIEDGKK-----IEKYSGA------------------RDLSTLKTYVEK 269
            :.:..:..:..: .||::....:     |:.|..|                  |:....|.:...
Human   266 KDLISELHIMSH-MLLFVSKSSESYGIIIQHYKLASKEFQNKILFILVDADEPRNGRVFKYFRVT 329

  Fly   270 MVGVPLEKTAGEAGD-------EKVVIEEVA--GEEDAAKKLTPQQLTGE--DEFDQAIA----- 318
            .|.:|..:....:.|       :.:..|.:.  |....:|..|..|.:.|  ..:||.:.     
Human   330 EVDIPSVQILNLSSDARYKMPSDDITYESLKKFGRSFLSKNATKHQSSEEIPKYWDQGLVKQLVG 394

  Fly   319 ----------EGVAFIKFYAPWCGHCQKLQPTWEQLATETHQAQSSVKIAKVDCTAPENKQVCID 373
                      |...|:.|||||...|:.|.|..|:|..: :|..|::.|||:|.||.:.:.:.:|
Human   395 KNFNVVVFDKEKDVFVMFYAPWSKKCKMLFPLLEELGRK-YQNHSTIIIAKIDVTANDIQLMYLD 458

  Fly   374 QQVEGYPTLFLYKNGQRQNE-YEGSRSLPE----LQAYLK-KFLGHDEL 416
            :    ||...|:.:|.:|.. |:|..:|..    |::::| |....|||
Human   459 R----YPFFRLFPSGSQQAVLYKGEHTLKGFSDFLESHIKTKIEDEDEL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prtpNP_001188583.1 PDI_a_ERp46 38..140 CDD:239303 22/74 (30%)
ER_PDI_fam 39..409 CDD:273457 91/430 (21%)
PDI_a_ERp46 167..267 CDD:239303 20/135 (15%)
PDI_a_ERp46 303..407 CDD:239303 35/125 (28%)
PDILTNP_777584.1 YbbN 46..501 CDD:331940 92/435 (21%)
Prevents secretion from ER. /evidence=ECO:0000255|PROSITE-ProRule:PRU10138 581..584
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0191
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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