DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PhKgamma and RAD53

DIOPT Version :9

Sequence 1:NP_511129.3 Gene:PhKgamma / 32120 FlyBaseID:FBgn0011754 Length:560 Species:Drosophila melanogaster
Sequence 2:NP_015172.1 Gene:RAD53 / 855950 SGDID:S000006074 Length:821 Species:Saccharomyces cerevisiae


Alignment Length:570 Identity:139/570 - (24%)
Similarity:231/570 - (40%) Gaps:149/570 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EILGRGISSTVRRCIEKETGKEFAAKIIDLGATTESGETNPYHMLEATRQEISILRQVMGHPYII 91
            |::|:|..:||::.||:.|||.||.|||        .:......::...:|:.:| |.:.||.|:
Yeast   202 EVVGQGAFATVKKAIERTTGKTFAVKII--------SKRKVIGNMDGVTRELEVL-QKLNHPRIV 257

  Fly    92 DLQDVFESDAFVFLVFELCPKGELFDYLTSVVTLSEKKTRTIMRQIFEGVEYIHAKSIVHRDLKP 156
            .|:..:|.....::|.|....|:|.|::.:...:.|...|.|.|||...::|||:..|.||||||
Yeast   258 RLKGFYEDTESYYMVMEFVSGGDLMDFVAAHGAVGEDAGREISRQILTAIKYIHSMGISHRDLKP 322

  Fly   157 ENILLDENHN--VKITDFGFAKQLQEGEKLTNLCGTPGYLAPETLKCNMFEGSPG-------YSQ 212
            :|||::::..  |||||||.||....|..:...|||..|:|||.::......||.       ||.
Yeast   323 DNILIEQDDPVLVKITDFGLAKVQGNGSFMKTFCGTLAYVAPEVIRGKDTSVSPDEYEERNEYSS 387

  Fly   213 EVDIWACGVIMFTLLVGCPPFWHRKQMVMLRNIMEGKYSFTSPEWADISEDPKDLIRKCLVVDPS 277
            .||:|:.|.:::.:|.|..||....|..:.:.|..|.|.....:...|||:.:|.|...|.|||:
Yeast   388 LVDMWSMGCLVYVILTGHLPFSGSTQDQLYKQIGRGSYHEGPLKDFRISEEARDFIDSLLQVDPN 452

  Fly   278 QRITVKEVLRHPFFNQMVLMGDRRHPAPPIAPAQTNSRHLLQPEASSY-RFGQLNSSCAGAPNYL 341
            .|.|..:.|.||:. :|..:|                       :.|| .|.|::.|        
Yeast   453 NRSTAAKALNHPWI-KMSPLG-----------------------SQSYGDFSQISLS-------- 485

  Fly   342 YCAPQSSYSSNRMRDGALDDAGASAASATCHVMSPSNASNSYATNTTANTSNSALASASSHKTLT 406
                 .|.|..::.:. :|||......|...:                                 
Yeast   486 -----QSLSQQKLLEN-MDDAQYEFVKAQRKL--------------------------------- 511

  Fly   407 AMVYYQQQPQQHQTQQQQQQYQQQQTTQLPVQLQLQHPLLQTGGDGKQSVYAPP---TVQLRKQS 468
                  |..||.|.|.|:.|..:.|..::|....::              |..|   ..:.|:|.
Yeast   512 ------QMEQQLQEQDQEDQDGKIQGFKIPAHAPIR--------------YTQPKSIEAETREQK 556

  Fly   469 RF---------NARKKFQFAILVIR----AIIRIRRLRFTAEPLHVEEAIRDPYRVKVLR----K 516
            ..         :::||.....|.::    :||:        |.|.:::.: :|:.:....    |
Yeast   557 LLHSNNTENVKSSKKKGNGRFLTLKPLPDSIIQ--------ESLEIQQGV-NPFFIGRSEDCNCK 612

  Fly   517 VIDGCAFRVYGHWVKKGEGQNRAALFENTPR---------TELHALYINN 557
            :.|....||:....||.....: :::|:..:         |..:..|:||
Yeast   613 IEDNRLSRVHCFIFKKRHAVGK-SMYESPAQGLDDIWYCHTGTNVSYLNN 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhKgammaNP_511129.3 STKc_PhKG 19..291 CDD:270995 94/272 (35%)
S_TKc 23..291 CDD:214567 94/272 (35%)
RAD53NP_015172.1 FHA 63..134 CDD:238017
STKc_Rad53_Cds1 196..465 CDD:271000 93/271 (34%)
FHA 578..684 CDD:238017 17/94 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.