DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment PhKgamma and Dcx

DIOPT Version :9

Sequence 1:	NP_511129.3	Gene:	PhKgamma / 32120	FlyBaseID:	FBgn0011754	Length:	560	Species:	Drosophila melanogaster
Sequence 2:	XP_006257444.1	Gene:	Dcx / 84394	RGDID:	620670	Length:	366	Species:	Rattus norvegicus

Alignment Length:	228	Identity:	38/228 - (16%)
Similarity:	76/228 - (33%)	Gaps:	81/228 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly    41 IEKETGKEFAAKIIDLGATTESGETNPYHMLEATRQEISILRQVMGHPYIIDLQDVFESDAFVFL 105
            :..:..:.|.|.:.||..:.......|        |.:..:..:.|...|..:.::.|.:::|
  Rat    72 VSSDRFRSFDALLADLTRSLSDNINLP--------QGVRYIYTIDGSRKIGSMDELEEGESYV-- 126

  Fly   106 VFELCPKGELF-----------DYLTSVVTLSEKKTRTIM-----RQIFEGVEYIHAK--SIVHR 152
                |.....|           ::..:|.|.:..|....:     .|..|..:::..|  :|:..
  Rat   127 ----CSSDNFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSAQARENKDFVRPKLVTIIRS 187

  Fly   153 DLKP----------------ENILLDENHNVKITDFGFAKQLQ--EGEKLTNL------------ 187
            .:||                |.:|.|....:|: :.|..|:|.  :|:::|.|
  Rat   188 GVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKL-ETGVVKKLYTLDGKQVTCLHDFFGDDDVFIA 251

  Fly   188 CGTPGYLAPETLK------------CNMFEGSP 208
            ||      ||..:            |.:.:|:|
  Rat   252 CG------PEKFRYAQDDFSLDENECRVMKGNP 278

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
PhKgamma	NP_511129.3	STKc_PhKG	19..291	CDD:270995	38/228 (17%)
PhKgamma	NP_511129.3	S_TKc	23..291	CDD:214567	38/228 (17%)
Dcx	XP_006257444.1	DCX1_DCX	51..139	CDD:340529	12/80 (15%)
		DCX2	176..259	CDD:340589	18/89 (20%)
		KLF8_12_N	<284..>343	CDD:424081
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D330091at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010