DRSC/TRiP Functional Genomics Resources

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Protein Alignment PhKgamma and camk2b

DIOPT Version :9

Sequence 1:NP_511129.3 Gene:PhKgamma / 32120 FlyBaseID:FBgn0011754 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_012814756.1 Gene:camk2b / 780379 XenbaseID:XB-GENE-868398 Length:624 Species:Xenopus tropicalis


Alignment Length:516 Identity:146/516 - (28%)
Similarity:226/516 - (43%) Gaps:96/516 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FYAKYEPKEILGRGISSTVRRCIEKETGKEFAAKIIDLGATTESGETNPYHMLEATRQEISILRQ 83
            |..:|:..|.:|:|..|.||||::..||.|:|||||:    |:......:..||   :|..|.| 
 Frog     8 FTDEYQLYEEIGKGAFSVVRRCVKLCTGHEYAAKIIN----TKKLSARDHQKLE---REARICR- 64

  Fly    84 VMGHPYIIDLQDVFESDAFVFLVFELCPKGELFDYLTSVVTLSEKKTRTIMRQIFEGVEYIHAKS 148
            ::.||.|:.|.|....:.|.:|:|:|...||||:.:.:....||......::||.|.|.:.|...
 Frog    65 LLKHPNIVRLHDSISEEGFHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 129

  Fly   149 IVHRDLKPENILLD---ENHNVKITDFGFAKQLQ-EGEKLTNLCGTPGYLAPETLKCNMFEGSPG 209
            :|||||||||:||.   :...||:.|||.|.::| :.:......||||||:||.|:      ...
 Frog   130 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR------KEA 188

  Fly   210 YSQEVDIWACGVIMFTLLVGCPPFWHRKQMVMLRNIMEGKYSFTSPEWADISEDPKDLIRKCLVV 274
            |.:.|||||||||::.||||.||||...|..:.:.|..|.|.|.||||..::.:.|:||.:.|.:
 Frog   189 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTI 253

  Fly   275 DPSQRITVKEVLRHPFFNQMVLMGDRRHPAPPI-APAQTNSRHLLQPEASSYRFGQLNSSCAGAP 338
            :|::|||..|.|:||:..|...:....|....: ...:.|:|..|:        |.:.::.....
 Frog   254 NPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK--------GAILTTMLATR 310

  Fly   339 NYLYCAPQSSYSSNRMRDGALDDAGASAA-----SATCHVMSPSNASNSYATNTTAN----TSNS 394
            |:       |..........:..|..|.|     ..|..:::.........||:|.|    ||..
 Frog   311 NF-------SVGRQTTAPATITTAATSTALGLVEQGTKSLLNKKTDVGKPQTNSTKNSAGVTSPK 368

  Fly   395 ALASASSHKTLTAMVY-----YQQQPQQHQTQQQQQQYQ-----------------------QQQ 431
            .....::.:|.|.:::     .::......|..:.::.:                       |..
 Frog   369 GPIPPAALETQTTVIHNLVDGIKESSDSTHTNPEDEEMKVMKFSDILSSVRRGSGALEAEGPQAA 433

  Fly   432 TTQLPVQLQLQH-PLLQ------------TGGDGKQSVYA------------PPTVQLRKQ 467
            ..|.|:.....| ||.|            .|.:.:...|:            .|.||.|||
 Frog   434 VAQQPLSPSFPHSPLAQPARFTDIFNTVRRGSEAEGVQYSNTQHRLSQPHLNSPFVQPRKQ 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhKgammaNP_511129.3 STKc_PhKG 19..291 CDD:270995 110/275 (40%)
S_TKc 23..291 CDD:214567 109/271 (40%)
camk2bXP_012814756.1 STKc_CaMKII 10..301 CDD:270988 114/312 (37%)
S_TKc 12..270 CDD:214567 109/271 (40%)
CaMKII_AD 492..619 CDD:285524 3/3 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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