DRSC/TRiP Functional Genomics Resources

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Protein Alignment PhKgamma and Camk2b

DIOPT Version :9

Sequence 1:NP_511129.3 Gene:PhKgamma / 32120 FlyBaseID:FBgn0011754 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_006251232.1 Gene:Camk2b / 24245 RGDID:2262 Length:666 Species:Rattus norvegicus


Alignment Length:412 Identity:132/412 - (32%)
Similarity:192/412 - (46%) Gaps:62/412 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FYAKYEPKEILGRGISSTVRRCIEKETGKEFAAKIIDLGATTESGETNPYHMLEATRQEISILRQ 83
            |..:|:..|.:|:|..|.||||::..||.|:|||||:    |:......:..||   :|..|.| 
  Rat    10 FTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIIN----TKKLSARDHQKLE---REARICR- 66

  Fly    84 VMGHPYIIDLQDVFESDAFVFLVFELCPKGELFDYLTSVVTLSEKKTRTIMRQIFEGVEYIHAKS 148
            ::.|..|:.|.|....:.|.:|||:|...||||:.:.:....||......::||.|.|.:.|...
  Rat    67 LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 131

  Fly   149 IVHRDLKPENILLD---ENHNVKITDFGFAKQLQ-EGEKLTNLCGTPGYLAPETLKCNMFEGSPG 209
            :|||||||||:||.   :...||:.|||.|.::| :.:......||||||:||.|:      ...
  Rat   132 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR------KEA 190

  Fly   210 YSQEVDIWACGVIMFTLLVGCPPFWHRKQMVMLRNIMEGKYSFTSPEWADISEDPKDLIRKCLVV 274
            |.:.|||||||||::.||||.||||...|..:.:.|..|.|.|.||||..::.:.|:||.:.|.:
  Rat   191 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTI 255

  Fly   275 DPSQRITVKEVLRHPFFNQMVLMGDRRHPAPPI---------------------------APAQT 312
            :|::|||..|.|:||:..|...:....|....:                           ...||
  Rat   256 NPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLKGAILTTMLATRNFSVGRQT 320

  Fly   313 NSRHLLQPEASSYRFG-------QLNSSCAGAPNYLYCAPQSSYSSNRMR----DGALDDAGASA 366
            .:...:...||....|       .||....|.      .||::.:.|...    .|:|..|....
  Rat   321 TAPATMSTAASGTTMGLVEQAKSLLNKKADGV------KPQTNSTKNSSAITSPKGSLPPAALEP 379

  Fly   367 ASATCHVMSPSNASNSYATNTT 388
            .:...|........:|.:||||
  Rat   380 QTTVIHNPVDGIKESSDSTNTT 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhKgammaNP_511129.3 STKc_PhKG 19..291 CDD:270995 110/275 (40%)
S_TKc 23..291 CDD:214567 109/271 (40%)
Camk2bXP_006251232.1 STKc_CaMKII 12..303 CDD:270988 111/304 (37%)
CaMKII_AD 534..661 CDD:285524
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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