DRSC/TRiP Functional Genomics Resources

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Protein Alignment PhKgamma and camk2a

DIOPT Version :9

Sequence 1:NP_511129.3 Gene:PhKgamma / 32120 FlyBaseID:FBgn0011754 Length:560 Species:Drosophila melanogaster
Sequence 2:XP_012813848.1 Gene:camk2a / 100101771 XenbaseID:XB-GENE-868353 Length:516 Species:Xenopus tropicalis


Alignment Length:395 Identity:134/395 - (33%)
Similarity:202/395 - (51%) Gaps:45/395 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FYAKYEPKEILGRGISSTVRRCIEKETGKEFAAKIIDLGATTESGETNPYHMLEATRQEISILRQ 83
            |..:|:..|.||:|..|.||||::..:|:|:|||||:    |:......:..||   :|..|.| 
 Frog     9 FSEEYQLFEELGKGAFSIVRRCVKVLSGQEYAAKIIN----TKKLSARDHQKLE---REARICR- 65

  Fly    84 VMGHPYIIDLQDVFESDAFVFLVFELCPKGELFDYLTSVVTLSEKKTRTIMRQIFEGVEYIHAKS 148
            ::.||.|:.|.|....:...:|||:|...||||:.:.:....||......::||.|.|.:.|...
 Frog    66 LLKHPNIVRLHDSISEEGHHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130

  Fly   149 IVHRDLKPENILLD---ENHNVKITDFGFAKQLQEGEKLT--NLCGTPGYLAPETLKCNMFEGSP 208
            :|||||||||:||.   :...||:.|||.|.:: |||:..  ...||||||:||.|:      ..
 Frog   131 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTPGYLSPEVLR------KD 188

  Fly   209 GYSQEVDIWACGVIMFTLLVGCPPFWHRKQMVMLRNIMEGKYSFTSPEWADISEDPKDLIRKCLV 273
            .|.:.||:||||||::.||||.||||...|..:.:.|..|.|.|.||||..::.:.||||.|.|.
 Frog   189 PYGKAVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLT 253

  Fly   274 VDPSQRITVKEVLRHPFFNQMVLMGDRRHPAPPI-APAQTNSRHLLQPEASSYRFGQLNSSCAGA 337
            ::||:|||..|.|:||:.:....:....|....: ...:.|:|..|:        |.:.::....
 Frog   254 INPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK--------GAILTTMLAT 310

  Fly   338 PNYLYCAPQSSYSSNRMRDGALDDAGASAASATCHVMSPSNASNSYATNTT---ANTSNSALASA 399
            .|:    ......||:..||......:|:...         ..:|.:||||   .:|.:.:||:.
 Frog   311 RNF----SGGKSGSNKKNDGVKKRKSSSSVQL---------MESSESTNTTIEDEDTKDFSLAAQ 362

  Fly   400 SSHKT 404
            :.:.|
 Frog   363 NENIT 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhKgammaNP_511129.3 STKc_PhKG 19..291 CDD:270995 114/276 (41%)
S_TKc 23..291 CDD:214567 113/272 (42%)
camk2aXP_012813848.1 STKc_CaMKII 11..302 CDD:270988 117/313 (37%)
CaMKII_AD 384..511 CDD:285524
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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