DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB2 and Hoxb2

DIOPT Version :9

Sequence 1:NP_002136.1 Gene:HOXB2 / 3212 HGNCID:5113 Length:356 Species:Homo sapiens
Sequence 2:NP_598793.2 Gene:Hoxb2 / 103889 MGIID:96183 Length:354 Species:Mus musculus


Alignment Length:357 Identity:289/357 - (80%)
Similarity:300/357 - (84%) Gaps:4/357 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MNFEFEREIGFINSQPSLAECLTSFPAVLETFQTSSIKESTLIPPPPPFEQTFPSLQPGASTLQR 65
            ||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||||||
Mouse     1 MNFEFEREIGFINSQPSLAECLTSFPAVLETFQTSSIKESTLIPPPPPLEQTFPSLQLGASTLQR 65

Human    66 PRSQKRAEDGPALPPPPPPPLPAAPPAPEFPWMKEKKSAKKPSQSATSPSPAASAVPASGVGSPA 130
            |.|||:|.|||||  ..|||||.|||||||||||||||.|||||||.|||||||:|.||.||||:
Mouse    66 PGSQKQAGDGPAL--RSPPPLPVAPPAPEFPWMKEKKSTKKPSQSAASPSPAASSVRASEVGSPS 128

Human   131 DGLGLPEAGGGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRR 195
            ||.||||.||.|:||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   129 DGPGLPECGGSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRR 193

Human   196 MKHKRQTQHREPPDGEPACPGALEDICDPAEEPAASPGGPSASRAAWEACCHPPEVVPGALSADP 260
            |||||||||||||:|||..|.|.:|..:|||||..|||..:..|.. |||.||.|...|...|.|
Mouse   194 MKHKRQTQHREPPEGEPGGPSAQDDAGEPAEEPTVSPGDVATHRLR-EACFHPAEAAQGPRGAPP 257

Human   261 RPL-AVRLEGAGASSPGCALRGAGGLEPGPLPEDVFSGRQDSPFLPDLNFFAADSCLQLSGGLSP 324
            ..| |..||..|||||||.:..|||.:..|||||....||||||||||||||||||||:||||||
Mouse   258 SALPATTLESVGASSPGCTMLRAGGRQSEPLPEDACPERQDSPFLPDLNFFAADSCLQMSGGLSP 322

Human   325 SLQGSLDSPVPFSEEELDFFTSTLCAIDLQFP 356
            ||||||||||||||||||||||||||||||||
Mouse   323 SLQGSLDSPVPFSEEELDFFTSTLCAIDLQFP 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB2NP_002136.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..142 84/102 (82%)
Antp-type hexapeptide 94..99 4/4 (100%)
Homeobox 147..199 CDD:278475 51/51 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..240 26/42 (62%)
Hoxb2NP_598793.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..143 85/105 (81%)
Antp-type hexapeptide 92..97 4/4 (100%)
Homeobox 145..197 CDD:278475 51/51 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..231 26/37 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..295 23/48 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83968987
Domainoid 1 1.000 244 1.000 Domainoid score I20359
eggNOG 1 0.900 - - E2759_KOG0489
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37584
Inparanoid 1 1.050 567 1.000 Inparanoid score I11086
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG42126
OrthoDB 1 1.010 - - D163459at40674
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 1 1.000 - - oto126673
orthoMCL 1 0.900 - - OOG6_117948
Panther 1 1.100 - - LDO PTHR45664
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6877
SonicParanoid 1 1.000 - - X2356
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1919.300

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