DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB2 and Hoxb2

DIOPT Version :10

Sequence 1:NP_002136.1 Gene:HOXB2 / 3212 HGNCID:5113 Length:356 Species:Homo sapiens
Sequence 2:NP_001386664.1 Gene:Hoxb2 / 100361765 RGDID:2319509 Length:355 Species:Rattus norvegicus


Alignment Length:358 Identity:290/358 - (81%)
Similarity:302/358 - (84%) Gaps:5/358 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MNFEFEREIGFINSQPSLAECLTSFPAVLETFQTSSIKESTLI-PPPPPFEQTFPSLQPGASTLQ 64
            ||||||||||||||||||||||||||||||||||||||||||| |||||.||||||||.||||||
  Rat     1 MNFEFEREIGFINSQPSLAECLTSFPAVLETFQTSSIKESTLIPPPPPPLEQTFPSLQLGASTLQ 65

Human    65 RPRSQKRAEDGPALPPPPPPPLPAAPPAPEFPWMKEKKSAKKPSQSATSPSPAASAVPASGVGSP 129
            ||.|||.|.|||||  .||||||.|||||||||||||||||||||||.:||||||:|.|||||||
  Rat    66 RPGSQKPAGDGPAL--RPPPPLPVAPPAPEFPWMKEKKSAKKPSQSAATPSPAASSVRASGVGSP 128

Human   130 ADGLGLPEAGGGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNR 194
            :||.||||:||.|:|||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   129 SDGPGLPESGGSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNR 193

Human   195 RMKHKRQTQHREPPDGEPACPGALEDICDPAEEPAASPGGPSASRAAWEACCHPPEVVPGALSA- 258
            ||||||||||||||||||....|.:|..:|||||..|||..::.|.. |||..|.|...|...| 
  Rat   194 RMKHKRQTQHREPPDGEPGGLSAQDDAGEPAEEPTVSPGDVASHRLR-EACFLPAEAAQGPRGAP 257

Human   259 DPRPLAVRLEGAGASSPGCALRGAGGLEPGPLPEDVFSGRQDSPFLPDLNFFAADSCLQLSGGLS 323
            .|.|.|..||..|||||||.:..||||:..|||||....|||||||||||||||||||.:|||||
  Rat   258 PPLPPATALESVGASSPGCTMLRAGGLQSEPLPEDACPERQDSPFLPDLNFFAADSCLPMSGGLS 322

Human   324 PSLQGSLDSPVPFSEEELDFFTSTLCAIDLQFP 356
            |||||||||||||||||||||||||||||||||
  Rat   323 PSLQGSLDSPVPFSEEELDFFTSTLCAIDLQFP 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB2NP_002136.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..142 86/103 (83%)
Antp-type hexapeptide 94..99 4/4 (100%)
Homeodomain 144..200 CDD:459649 55/55 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..240 26/42 (62%)
Hoxb2NP_001386664.1 Homeodomain 143..199 CDD:459649 55/55 (100%)

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