DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bif and maco1

DIOPT Version :9

Sequence 1:NP_001259457.1 Gene:bif / 32119 FlyBaseID:FBgn0014133 Length:1305 Species:Drosophila melanogaster
Sequence 2:NP_001037870.1 Gene:maco1 / 733452 XenbaseID:XB-GENE-5804807 Length:661 Species:Xenopus tropicalis


Alignment Length:580 Identity:105/580 - (18%)
Similarity:203/580 - (35%) Gaps:166/580 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   583 RPRAAHRSNGVG--------GVASKVANYKSIIKDQKQPSS---------AAATPPPTGMGFASS 630
            ||.|||   .:|        |..|.| :||..::.||:...         ..|.||...|     
 Frog   152 RPFAAH---CIGYPVVTLGFGFKSYV-SYKMRLRKQKEVQKENEFYMQLLQQALPPEQQM----- 207

  Fly   631 TPLRHVHPDIIPRQVDSPVSALSVMMRRMELQE--------------PETPERET-RDAEATPQS 680
              |:...     |:.:.....||.|...:.||.              ||...:|. :|.:...|:
 Frog   208 --LQRQE-----REAEEAAKGLSEMDSSVLLQHNGGLSSNKKISSTLPELEYKEKGKDKDVKRQN 265

  Fly   681 EALSETERNDRDEGDGEVD-DDNHNNNDDDHDDGDDGSDNNEQRDKMGAAAAGD--------KPK 736
            ..::.......|....|:: .:||.|:  ...:.|.||..|..::....|::.:        ...
 Frog   266 LGINNNILQPTDSKVQEIEYMENHINS--KRLNNDLGSTENLLKEDPCTASSKNYKNTTGTANSS 328

  Fly   737 PPAESAAGGAQRSFAASTENAHVASGSSSSTSASVRK------LSNNNDSSSGPAVTKQIGVIRP 795
            |.:.||:.|:..|.::||:|   .....||.|.:..|      :.||..|.....|..:..|.:.
 Frog   329 PRSHSASNGSIPSSSSSTKN---DKKKCSSKSPNTHKDPTENCIPNNQLSKPDTLVRLEQDVKKL 390

  Fly   796 LFNSQGAGSTPLTSREIEKNRINEMKKSTATDAGGSVSGSGTVAGAGSGTSPTTSLDSVINTKEA 860
            ..:.||       ||::|::..:::...|:|:.|                         |.|:  
 Frog   391 KADLQG-------SRQVEQDLRSQIGLLTSTERG-------------------------IRTE-- 421

  Fly   861 ASSETDASASPLWTLRKLRNQSQTAGGGSGPSSSLHST--------ENTSMVFNFSKSTKEVPDY 917
                          :.:||.:::..      .:.||:.        :..|.:....|:.:|...:
 Frog   422 --------------IGQLRQENELL------QNKLHNAVQMKQKDKQTISQLEKKLKAEQEARAF 466

  Fly   918 IESDVVIYRRKRELPKPNEPGFVLLGDLS----VETSTDTDYDDYSMCPPSPCDV--------EF 970
            :|..::..::::::.:......|.....:    .||..:...|..|.|.....|:        ||
 Frog   467 VEKQLLEEKKRKKIEEATAARAVAFAAANRGECTETLKNRIRDLESECKKLSIDMKLKEDQIREF 531

  Fly   971 ENANIVIDGKSSIRQKPKESSFRVQFNDTLTSTFEYPSEASMTIEDPPYADPFGHVSKHHQMLLA 1035
            |   |.:......::..|::...:.....:....:: .|.|::.|.....|.|..:....:.|..
 Frog   532 E---IKVQELRKYKENEKDTEVLMSALSAMQDKTQH-LENSLSAETRIKLDLFSALGDAKRQLEI 592

  Fly  1036 EQMHLLQHQEQL-ELEQ------------MHQLG---LAPEQHHHVTVDEIIELPTSTAG 1079
            .|..:||..::: :|:|            .:..|   |:|...|:.:  :.:|  ||::|
 Frog   593 AQGQILQKDQEIKDLKQKIAEVMAVMPSIAYTAGTSTLSPVSPHYSS--KFVE--TSSSG 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bifNP_001259457.1 None
maco1NP_001037870.1 Macoilin 2..659 CDD:286769 105/580 (18%)
CarR_dom_SF 29..113 CDD:274590
Phlebovirus_NSM <507..634 CDD:148701 23/130 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13289
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.