DRSC/TRiP Functional Genomics Resources

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Protein Alignment bif and maco1b

DIOPT Version :9

Sequence 1:NP_001259457.1 Gene:bif / 32119 FlyBaseID:FBgn0014133 Length:1305 Species:Drosophila melanogaster
Sequence 2:NP_956757.2 Gene:maco1b / 393435 ZFINID:ZDB-GENE-040426-1188 Length:699 Species:Danio rerio


Alignment Length:647 Identity:110/647 - (17%)
Similarity:218/647 - (33%) Gaps:188/647 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 CKPGQSVAEGKPSAK-----ETIVDNSKSCSKTKSISDKLQSNKFIIQQQQQ---QQQQQQQQQQ 281
            |:|..:...|.|...     ::.|.......|.|.:.   :.|:|.:|..||   .:||..|:|:
Zfish   151 CRPFAAHCIGYPVVTLGFGFKSYVSYKMRLRKQKEVQ---KENEFYMQLLQQALPPEQQLIQRQE 212

  Fly   282 LSPTKVTVKPTMVAMQEM----KKTTKQNGQHRHLAGKIGSVAGGDVDPQHPPTNPIPDSLDTGE 342
            ....:........|.:.:    .....|||.           |||    :.|.:|.:|:      
Zfish   213 REAEEAAAAAAAAASKSIHDVDSPAVAQNGS-----------AGG----KKPSSNTLPE------ 256

  Fly   343 DLSYGPGIVSKLRCRYLSLALRESRQQSSKQRLQRSTSLNTLLDRDDDEVEVEEPEMTNSQVRAK 407
                       |..|.......||::|.:..:...|::.:::|...|:  :.:|.|...:.|.:|
Zfish   257 -----------LEYREKERGKNESKKQHNHNQNHHSSTSSSILPSVDN--KAQEMEYMENHVNSK 308

  Fly   408 S-TPPPILGAKPTPKPSSQHQRPVSLGANGAGSAVNPPSNSDQAQTGAVANGGAGSGQRSRHFKR 471
            . :...:||:...          :....:.:.|:.:..|||::....| :.||.|.|..|   .|
Zfish   309 RLSSSDLLGSTEN----------LLKDEHSSSSSSSTSSNSNKNYKNA-SGGGGGGGSSS---PR 359

  Fly   472 GNEVMKRARSVEALLCEKSPWNSQRISTAGAAAAAAPSPPAPKATAAAPSPVTSPTCVTIEDKIH 536
            |:                           |.|..:.||...|.::|::.|              .
Zfish   360 GH---------------------------GTANGSVPSSSGPSSSASSSS--------------K 383

  Fly   537 NARERLHSGTDTAPPKR--LTSIIDDTERPPPDL---VKQTLKMFEA--SANRRPRAAHRSNGVG 594
            ..|::.:.|...:...|  :.:.|.:.:...|:.   ::|.:|..:|  .|:|:.....||. :|
Zfish   384 GDRKQKYGGGKNSASHRDPVENCIPNNQLSKPEALVRLEQDVKKLKADLQASRQTEQDLRSQ-LG 447

  Fly   595 GVASKVANYKSIIKDQKQPSSAAATPPPTGMGFASSTPLRHVHPDIIPRQVDSPVSALSVMMRRM 659
            .:.:...:.:|.:...:|.:....               ..:|..:..:|.|.  ..|..:.:|:
Zfish   448 SLGTSERSIRSELGQLRQENELLQ---------------NKLHNAVQAKQKDK--QTLGQLEKRL 495

  Fly   660 ELQE----------PETPERETRDAEATPQSEALSETERNDRDEG-----------------DGE 697
            :.::          .|..:|:..:.....::.||:...|.:..|.                 |.:
Zfish   496 KAEQEARAAAEKLLAEEKKRKKLEEATAARAVALAAATRGECTESLRRRISELEAECKKLTLDIK 560

  Fly   698 VDDDN-----------HNNNDDDHDDGDDGSDNNEQRDKM----GAAAAGDKPKPPAESAAGGAQ 747
            |.:|.           |...:::.|.....|..:..:||.    .:.:|..:.|....||.|.|:
Zfish   561 VKEDQIRELELKVQELHKYKENEKDTEVLMSALSAMQDKTQHLENSLSAETRIKLDLFSALGDAK 625

  Fly   748 RSFAASTENAHVASGSSSSTSASVRKLSNNNDSSSGPAVTKQIGVIRPLFNSQGAGS-TPLT 808
            |..       .:|.|........::.|...        :.:.:.|:..:..|...|| ||:|
Zfish   626 RQL-------EIAQGQILQKDQEIKDLKQK--------IAEVMAVMPSVVYSADTGSMTPVT 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bifNP_001259457.1 None
maco1bNP_956757.2 Macoilin 2..697 CDD:286769 110/647 (17%)
CarR_dom_SF 29..113 CDD:274590
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..289 16/101 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..411 23/133 (17%)
TolA_bind_tri 421..>484 CDD:292947 12/78 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 432..451 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 679..699
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588390
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13289
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.030

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