DRSC/TRiP Functional Genomics Resources

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Protein Alignment bif and maco-1

DIOPT Version :9

Sequence 1:NP_001259457.1 Gene:bif / 32119 FlyBaseID:FBgn0014133 Length:1305 Species:Drosophila melanogaster
Sequence 2:NP_491902.4 Gene:maco-1 / 183963 WormBaseID:WBGene00017066 Length:897 Species:Caenorhabditis elegans


Alignment Length:581 Identity:117/581 - (20%)
Similarity:204/581 - (35%) Gaps:161/581 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 QAASITSPTDGSCGALAEANAAPGAIADFTEPATISSTSQKRN---------------------- 103
            ||||.|.||......:.:.|      .|.|...|.||..:|.|                      
 Worm   292 QAASATPPTSSKKNGIHKRN------GDVTSSTTTSSRKKKHNGNSGFNSTPPNDKKKGKSIRDV 350

  Fly   104 -MIGSEEKSEKSSISNTNSDS-----TGGHHSVVAVSLSPDAAATTNVTVTPIPKQRSSLLNTRS 162
             |...::..:..|..:|:|.:     .||..|::....|..|...:.|..:..|.: :||.|.:.
 Worm   351 DMDDGDDSDDDYSYRDTSSSTIEDQRRGGGISIIRFIFSSAAWLFSFVFESSTPSE-NSLSNQQI 414

  Fly   163 QEREMVRYILSESGERDGELESGEQPAGVVSNSRCGEVETGTIG----SPSSSANQNPNPNHLKT 223
            .:              |.:.|.|:   |...|.|...:.:.|.|    .||::.:||.|.:..:.
 Worm   415 DD--------------DEDYEDGD---GDKKNGRTDSMTSTTKGRANTMPSTTRSQNNNNSQKQQ 462

  Fly   224 KCKPGQS--------------------VAEGKPSAKETIVD-NSKSCSKTKSISDKLQSNKFIIQ 267
            |...|:|                    .|.|..:.:::..| |:.:.:..:|:|.:|:|.:..|.
 Worm   463 KQSNGKSHHQHSSHQNNHQKSNGNSNGHARGFAAVRDSSHDTNASNETDIRSMSRELESLRSEIS 527

  Fly   268 QQQQQQQQQQQQ------------QQLSPTKVTVKPTMVAMQEMKKTTKQNGQHR---------H 311
            .::.|::..:.|            ||||..::.|:...:....::: .:::.:|:         .
 Worm   528 SRRSQEEDFKLQVSMHESNETRLSQQLSNMRLKVEQMEIKCSSIER-HRESDKHQLEQAERKYAD 591

  Fly   312 LAGKIGSVAGG----------------DV-DPQHPPTNPIPDSLDTGEDLSYGPGIVSKLRCRYL 359
            |.||...:...                || :.|......:...:|             |||....
 Worm   592 LLGKKAEIEATLSAERKARMEVTSKKYDVAEHQRERERQLESEID-------------KLRIELK 643

  Fly   360 SLALRESRQQSSKQRLQRSTSLNTLLDRDDDEVEVE-------EPEMTNS---QVRAKSTPPPIL 414
            |......|.:|....|:     |...:.|.|.:.:|       ..:|..|   :.:.|.:....|
 Worm   644 SKDESNMRMESELHGLR-----NYKEENDIDSLNMELRFVRDKSHQMEESLAGENKLKQSLFKCL 703

  Fly   415 G-AKPTPK------PSSQHQRPVSLGANGAGSAVNPPSNSDQAQTGAVANGGAGSGQRS--RHFK 470
            | |:.|.|      ...|.:...|:|...:.:.:|..|:::...    .|....|.|.|  :|..
 Worm   704 GDARDTIKSLERRVQEFQIKNGSSIGGGSSETLMNGRSSTEANN----ENDTTASDQSSPHQHSA 764

  Fly   471 RGNEV--MKRARSVEALLCEKSPWNSQ--RISTAGAAAAAAPSPPAPKATAAAPSPVTSPT 527
            .|:.|  .|...||.......||:|.:  .|::.|:..|||..|..|....|..:.||:.|
 Worm   765 MGSPVPFAKMPLSVNVSNRHGSPFNGKVSPIASIGSVLAAAGGPAPPDYMMAVGANVTATT 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bifNP_001259457.1 None
maco-1NP_491902.4 Macoilin 38..707 CDD:313022 85/457 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162810
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13289
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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