DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vlet and Commd10

DIOPT Version :10

Sequence 1:NP_572738.1 Gene:Vlet / 32116 FlyBaseID:FBgn0030323 Length:238 Species:Drosophila melanogaster
Sequence 2:NP_001405720.1 Gene:Commd10 / 69456 MGIID:1916706 Length:254 Species:Mus musculus


Alignment Length:178 Identity:43/178 - (24%)
Similarity:82/178 - (46%) Gaps:16/178 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SPSVASASATSSTVGTSVTTTGRVDSSTEENPTSNTEPEYTLEELERL---VGVPRQDFLLLIKT 100
            |||:..|....:.:.|.  ...|:.|...:......|..::.||.|:|   ..:.:|:..|:::|
Mouse    12 SPSMKKAVPLINAIDTG--RFPRLLSRILQKLHLKAESSFSEEEEEKLQAAFSLEKQELHLVLET 74

  Fly   101 FSYILRRISTFIIKPSLLQRELREKLQLEDEAKIDAILRLWVRETTPIMNNLASKRYESNVIEDV 165
            .|::|.:.....:||:.||::| |.:.|..: |.:|....|.......:.....:....:.:|.|
Mouse    75 ISFVLEQAVYHNVKPAALQQQL-EMIHLRKD-KAEAFASAWSAMGQETVEKFRQRILGPHKLETV 137

  Fly   166 AWKLNMEISSHCQQREKTPLAVLQMKTA--------VGEDINIEMTQP 205
            .|:||::::...|.:.::|.||||:..:        |..| :|..|.|
Mouse   138 GWQLNLQMAHSAQAKLQSPQAVLQLGVSKEDAKFQTVSSD-HIHPTSP 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VletNP_572738.1 Commd10 12..224 CDD:240106 43/178 (24%)
Commd10NP_001405720.1 Commd10 15..174 CDD:240106 35/162 (22%)

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