DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and PTPN5

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_016873923.1 Gene:PTPN5 / 84867 HGNCID:9657 Length:719 Species:Homo sapiens


Alignment Length:414 Identity:101/414 - (24%)
Similarity:149/414 - (35%) Gaps:130/414 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1055 PPRPATQVVPTEVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIVAEDDAKNASGLEMPSWLDVQSY 1119
            ||.|.|.:.|                                  ||..::.|  ..||:    :|
Human   169 PPEPPTPLPP----------------------------------EDRRQSVS--RQPSF----TY 193

  Fly  1120 SVWLPYQAIDPYYPFENRSVEDFTIGTENCDNHKIGYCNGPLKSGTTYRVKVRAFTGADKFTDTA 1184
            |.|:            ...:||..:..:......:..|...:|            ..||..:.|.
Human   194 SEWM------------EEKIEDDFLDLDPVPETPVFDCVMDIK------------PEADPTSLTV 234

  Fly  1185 YSFPIQTDQ-DNTSLIVAITVPLTIILVLLVTLLFYKRRRNNCRK-------TTKDSRANDNMSL 1241
            .|..:|..: .|.||.:.:..|                   .|.:       :.::..|.:.:..
Human   235 KSMGLQERRGSNVSLTLDMCTP-------------------GCNEEGFGYLMSPREESAREYLLS 280

  Fly  1242 PDSVIEQNRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFA-----DLPCNRPKNR 1301
            ...|::          ||.....:.| .|....||.|:       |..|.     |:|....|||
Human   281 ASRVLQ----------AEELHEKALD-PFLLQAEFFEI-------PMNFVDPKEYDIPGLVRKNR 327

  Fly  1302 FTNILPYDHSRFKL-QPVDDDEGSDYINANYVPGHNSPRE-FIVTQGPLHSTRDDFWRMCWESNS 1364
            :..|||..|||..| .|..||..|.||||||:.|:....: :|.||||:.||..|||||.|:.::
Human   328 YKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQEHT 392

  Fly  1365 RAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEFML-CRGSEQRILR- 1427
            ..|||:|. .|:..|||.:|||.:.|.  |..:::.:....|..|:.:....| ||..|.|:|. 
Human   393 PIIVMITN-IEEMNEKCTEYWPEEQVA--YDGVEITVQKVIHTEDYRLRLISLKCRDWEDRLLHC 454

  Fly  1428 HFHFTT---------WPDFGVPNP 1442
            |.|...         .|:..||.|
Human   455 HQHLLPAAAAGGCGGHPEDHVPAP 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 68/189 (36%)
PTPc 1298..1525 CDD:238006 61/158 (39%)
PTPN5XP_016873923.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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