DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptprfb

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_009296732.1 Gene:ptprfb / 799867 ZFINID:ZDB-GENE-060503-530 Length:1927 Species:Danio rerio


Alignment Length:1709 Identity:397/1709 - (23%)
Similarity:638/1709 - (37%) Gaps:505/1709 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PPFGYPEPNTTIASREIGDEIQFSRALPGTKYNFWLYYTN--FTHHDWLTWTVTITTAPDPPSNL 129
            |.|..|..|..:              :||...|.......  ..:..|:|..|.:|...:.|   
Zfish   247 PRFSIPPTNHEV--------------MPGGSVNLTCVAVGAPMPYVKWMTGEVELTKDEEMP--- 294

  Fly   130 SVQVRSGKNAIILWSPPTQGSYTAFKIKVLGLSEASSSYNRTFQVNDNTFQHSVKELTPGATYQV 194
                 .|:|.:.|.:.....:||...|..||:.||             |.|.|||.|        
Zfish   295 -----VGRNVLELTNIRQSTNYTCVAISSLGMIEA-------------TAQVSVKAL-------- 333

  Fly   195 QAYTIYDGKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQP--PYPAGIY-THYKVSIEPP 256
                                  |..|....|.....|::.:.|..  |.|...| ..|:.  :..
Zfish   334 ----------------------PKPPTSLTVTETTATSVTLTWDSGNPEPVSYYIIQYRA--KTS 374

  Fly   257 DANDSVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTMSEDEISLPTTAQYRTVPLRPLNVTFD 321
            |.|    :.|.:|             |....|:|.                              
Zfish   375 DTN----FQEVDG-------------VATTRYSIG------------------------------ 392

  Fly   322 RDFITSNSFRVLWEAPKGISEFDKYQVSVATTRRQSTVPRSNEPVAFFDFRDIAEPGKTFNVIVK 386
                             |:|.:.:|:..|.........|.|             ||       |:
Zfish   393 -----------------GLSPYSEYEFRVMAVNNIGRGPPS-------------EP-------VE 420

  Fly   387 TVSG-KVTSWPATGDVTLRPLPVRNLRSINDDKTNTMIITWE--ADPASTQDEYRIVY-HELET- 446
            |.:| :..|.|        ||.|: .|.::   .:||::.||  .:|......|||.| .:|:. 
Zfish   421 TRTGEQAPSSP--------PLHVQ-ARMLS---ASTMLVQWEPPEEPNGQIRGYRIYYTSDLDAP 473

  Fly   447 ------FNGDTSTLTTDRTRFTLESLLPGRNYSLSVQAVSKKMESNETSIF-------VVTRPSS 498
                  .|.|.|.||      |:.||..|..|||.|...:...:...:.:.       |..:|||
Zfish   474 LSAWQKHNTDDSRLT------TISSLTTGITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSS 532

  Fly   499 PIIEDLKSIRMGLNISWKSDVNSKQEQYEVLYSRNGTSDLRTQKTKE--SRLVIKNLQPGAGYEL 561
              .|....:...:.::|...|.....:||:.| ....||.:...|.:  ....::.|:|...|:.
Zfish   533 --FEAEAELDTRILLTWLWPVQDPIIKYELQY-WEADSDNKIHVTFDPAGSYAVEGLKPDTLYKF 594

  Fly   562 KVFAVS--------HDL-----RSEPHAYFQAVYPNPPRNMTIETVRSNSVLVHW-SPPES---G 609
            .:.|.|        |.:     :|.|.|        ||:::.:.::.|.|:.|.| :||.:   |
Zfish   595 SLAARSEMGQGVFTHPIEARTAQSAPSA--------PPQDVHLLSLSSTSIKVSWVAPPAASRHG 651

  Fly   610 EFTEYSIRYRT----DSEQQWVRLPSVRSTEADITDMTKGEKYTIQVNT---VSFGVES-PVPQE 666
            ....|::.|:.    |:|:..|......::...:..:.|..:|.:.|..   |..|.|| .|...
Zfish   652 AIVRYTVSYQAVNGEDTERHEVPDIGADASSCVLEGLEKWTEYQVWVRAHTDVGPGPESTAVRIR 716

  Fly   667 VNTTVPPNPVSNI-IQLVDSRNITLEWPKP-----EGRVESYILKWWPSDNPGRVQTKNVSENKS 725
            .|..||..|...: ::.::|..|.:.|..|     .|::..|.:.:...:|         .|.:.
Zfish   717 TNEDVPGAPPRKLEVEALNSTAIRVTWKPPLSGKQHGQIRGYQVIYSRLEN---------GEPRG 772

  Fly   726 ADDLSTVRVLIGELMPGVQYKFDIQTTSYGILSGITSLYPRTMPLIQSDVVVANGEKEDERDTIT 790
            ..::..|      .:|..|:|.:..|....:::|:.|                    |.......
Zfish   773 HPNIMDV------ALPEAQWKIEESTEYEAVIAGLAS--------------------ETSYSVTV 811

  Fly   791 LSYTPTPQSSSKFDIYRFSLGDAEIRDKEKLANDTDRKVTFTGLVPGRLYNITVWTVSGGVASLP 855
            .:||              :.||. .|.|.|:       ||.||.|||:                 
Zfish   812 AAYT--------------TKGDG-ARSKAKV-------VTTTGAVPGK----------------- 837

  Fly   856 IQRQDRLYPEPITQLHATNITDTEISLRWDLPK---GEYNDFDIAY--LTADNL-LAQNMTTRNE 914
                      | |.:.:|.:.:|.: ::|..||   ||...:.:.|  |..:|. :.:...|.:.
Zfish   838 ----------P-TMIISTTVGNTAL-IQWQPPKDMVGELMGYRLRYKRLEEENYEIREFSRTDDH 890

  Fly   915 ITISDLRPHRNYTFTVVVRSGTESSVLRSSSPLSASFTTNEAVPGRVERFHPTDVQ-----PSEI 974
            .|::||.....|:|.:..         |:.:.|...:..:...|..|....|.::|     .|..
Zfish   891 HTVTDLHKGATYSFHLSA---------RNRAGLGEEYVKDIGTPEDVPSGFPLNLQVVGLTTSTT 946

  Fly   975 NFEWSLPS-SEANGVIRQFSIAYTNINNLTDAGMQDFESEEAFGVIKNLKPGETYVFKIQAKTAI 1038
            ...|..|: ||.||.|..:.:.|.:||:..::..:..:::.   .|:.|:|..||..::||.|:.
Zfish   947 RLTWEPPALSERNGRIIHYIVVYRDINSKQNSTNRTSDTQM---TIQGLRPDTTYDIRVQAFTSK 1008

  Fly  1039 GFGP-----EREYRQTMPILAPPRPATQVVPTEV---------YRSSSTIQIRFRKN-------- 1081
            |.||     :.....|.|..|.......|:.|.|         |:|....:|.:.:.        
Zfish  1009 GGGPISPSIQSRTMSTSPAFATSFGVKAVMKTSVLLTWEVPENYKSQVPFKILYNQQSVEVQGNL 1073

  Fly  1082 -----------------------------------------------YFSDQ--NGQ-------- 1089
                                                           |.:||  ||:        
Zfish  1074 KRKLITRLQPDTDYSFVLMSRGNSAGGLQQQVSIRTAPDLFKTKPVLYTADQTNNGKLTINLPKV 1138

  Fly  1090 -----VRMYTII---VAEDDAK---NASGLEMPSWLDVQSYSVWLPYQ-----AIDPYYPFENRS 1138
                 ||.|.|:   |::..::   |...:|:...|: .|....|..:     .:.||...:..:
Zfish  1139 PTSAPVRCYYIVVVPVSQTSSRQWINPDEMELDELLE-SSEGAHLRRRRRHTDTVRPYIAAKLST 1202

  Fly  1139 V-EDFTIGTENCDNHKIGYCNGPLKSGTTYRVKVRA-------FTGADK---FTDTAYSFPI--- 1189
            : |.||:|.| .|..  |:.|.||.:...::..|.|       .|..:|   |:.:.||.||   
Zfish  1203 LPETFTLGDE-LDYS--GFINRPLPNNQHFQCFVMAELKDQYPVTANEKQRTFSASPYSDPIIVQ 1264

  Fly  1190 -------QTDQDNTSLIVAITVPLTIILVLLVTLLFYKRRRNNCRKT--TKDSRAND-------- 1237
                   ..||.....::...:.:.:|:::::.:|.:|.::...|.:  .||..:..        
Zfish  1265 GENQMQRSVDQPEMLWVMGPVLAVVLIIIIVIAILLFKSKQERKRASPLPKDDHSGGVKDCLLAS 1329

  Fly  1238 ----------NMSLPDSVIEQNRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFAD 1292
                      |...|.  :.::.||.:...|:|...:.|:...|||:|:|.: ..|:......::
Zfish  1330 SSDPVEMRRLNYQTPG--MREHPPISVSELADHIERLKANDALRFSQEYESI-DPGQQFTWENSN 1391

  Fly  1293 LPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWR 1357
            |..|:||||:.|::.|||||..|.|||...||||||:||:.|:.....:|.|||||..|..||||
Zfish  1392 LEVNKPKNRYANVIAYDHSRVVLTPVDGVPGSDYINSNYIDGYRKQNAYIATQGPLPETLSDFWR 1456

  Fly  1358 MCWESNSRAIVMLTRCFEKGREKCDQYWP---NDTVPVFYGDIKVQILNDSHYADWVMTEFMLCR 1419
            |.||..:..|||:||..||.|.|||||||   .:|    ||.|:|.:|:....|.:.:..|.|.:
Zfish  1457 MIWEQRASTIVMMTRLEEKSRVKCDQYWPIRGTET----YGMIQVTMLDAVELATYSVRTFALYK 1517

  Fly  1420 --GSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLD 1482
              .||:|.:|.|.|..|||.|||..|..::.|:|..:.....:..|:||||||||||:|.||.:|
Zfish  1518 NGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVID 1582

  Fly  1483 RILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLL-AVLEGKENIVGPAREMHDNEG 1546
            .:|:::.....|||:|.|..||.:|.:|||||.|||.||:.|| |...|...:  |||.::.:. 
Zfish  1583 AMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEV--PARNLYAHI- 1644

  Fly  1547 YEGQQVQLDENGDVVATIE 1565
               |::.....|:.|..:|
Zfish  1645 ---QKLTQPSAGETVTAME 1660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 17/80 (21%)
fn3 220..304 CDD:278470 15/86 (17%)
fn3 315..391 CDD:278470 11/76 (14%)
FN3 405..494 CDD:238020 28/105 (27%)
FN3 511..574 CDD:238020 15/77 (19%)
FN3 583..671 CDD:238020 23/99 (23%)
fn3 683..753 CDD:278470 13/74 (18%)
fn3 787..850 CDD:278470 14/62 (23%)
fn3 866..935 CDD:278470 18/74 (24%)
fn3 961..1043 CDD:278470 25/92 (27%)
PTPc 1272..1525 CDD:214550 117/257 (46%)
PTPc 1298..1525 CDD:238006 110/231 (48%)
ptprfbXP_009296732.1 I-set 35..126 CDD:254352
Ig2_RPTP_IIa_LAR_like 155..233 CDD:319301
Ig3_RPTP_IIa_LAR_like 261..329 CDD:143216 19/88 (22%)
FN3 334..423 CDD:238020 26/174 (15%)
FN3 430..522 CDD:238020 28/109 (26%)
FN3 527..615 CDD:238020 18/90 (20%)
FN3 623..717 CDD:238020 22/93 (24%)
fn3 725..823 CDD:306538 21/147 (14%)
FN3 835..916 CDD:238020 22/118 (19%)
FN3 933..1021 CDD:238020 24/90 (27%)
PTPc 1397..1626 CDD:238006 111/232 (48%)
PTPc 1687..1917 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3031
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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