DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptpru

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_012812827.1 Gene:ptpru / 733850 XenbaseID:XB-GENE-922688 Length:1439 Species:Xenopus tropicalis


Alignment Length:1069 Identity:240/1069 - (22%)
Similarity:387/1069 - (36%) Gaps:335/1069 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   867 ITQLHATNIT---DTEISLRWDLPKGEYNDFDIAYLTADNLLAQNMTTRNEITISDLRPHRNYTF 928
            ||:.|..::.   .||:|...|.            :||:.       ..::.|:..|.|:|....
 Frog   407 ITRCHTFSVMLCYHTELSSIQDC------------VTAEG-------GSSQYTLHGLAPYRAVHC 452

  Fly   929 TVVV------RSGTESSVLRSSSPLSASFTTNEAVPGRVERFHPTDVQPSE--INFEWSLPSSEA 985
            .:::      :.|.|           .:..|.|.|||.:.. ....:.|.|  :...|..| .|.
 Frog   453 HLIITNPEGRKEGKE-----------VTCHTQEDVPGSIAS-ESLILVPQEDAVLLMWDKP-VEP 504

  Fly   986 NGVIRQFSIAYTNIN----NLTDAGMQDFESE---EAFGVIKNLKPGETYVFKIQAKTAIGFGPE 1043
            |||:.|:.|.|..|.    :::..|::....:   |...::.||.||.||:..::|:.:.|:||.
 Frog   505 NGVLTQYEIGYQIIESSDPSVSVPGIRGTVCKLPNETSHLLTNLLPGTTYLLSVRARNSKGYGPS 569

  Fly  1044 REYRQTMPILAPPRPATQVVPTEVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIV-AEDDAKNASG 1107
            .....|..|.||....:. :|..:..:..||.:..|.  ...:...|..|.::| .|...::...
 Frog   570 VLTELTTNISAPTFDYSD-LPPPLDETDKTITVLLRP--AQGRGSPVSFYQVLVEGETSPRSRRE 631

  Fly  1108 LEMP------------------SWLDVQSYSVWLPYQAIDPYYPFENRSVEDFTIGTENCDNHKI 1154
            |.:|                  |::..:.....||...  |:...:|||..              
 Frog   632 LGVPGCFPGAASYEEAEIEGSSSYVGAEIPPTDLPRDT--PFIVGDNRSYG-------------- 680

  Fly  1155 GYCNGPLKSGTTYRVKVRAFT---GADKFT-----------DTAYSFPIQTDQDNTSLIVAITV- 1204
            ||.|.||.....|.:.::|.:   |..:..           |:..|.......|...|::.|.. 
 Frog   681 GYWNPPLDPRRGYLIYLQAASHHRGETRLNCVRIARKAPCKDSQRSSMAPQRSDEMGLVLGICAG 745

  Fly  1205 PLTIILVLL--VTLLFYKRR------------------------RNNCRKTTKDSRANDNMSL-- 1241
            .|.:.::||  |.|:..|.|                        .:||....:.::..|..:|  
 Frog   746 GLVVFIILLGAVILIVRKGRTQFSYAYYPKPIGLTKSALPSRHENSNCAAPREHTKMTDQPTLLQ 810

  Fly  1242 -------------------PDSVIE-----------------------QNRP-ILIKNFAEHYRL 1263
                               ..||.|                       |..| :.:.:..:|...
 Frog   811 EEAALAFLHSYNTRVGEPRVGSVTESSSLLGGSPRRGGGRKGSPYHTGQLHPAVRVADLLQHINQ 875

  Fly  1264 MSADSDFRFSEEFEEL----------KHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPV 1318
            |.....:.|.:|:|..          |..||.      |:|.|           |:..|.:|.|:
 Frog   876 MKVAEGYGFKQEYESFFDWDVSKKKDKGKGRQ------DIPPN-----------YERHRVRLHPL 923

  Fly  1319 DDDEGSDYINANYV------PGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKG 1377
            ..:..|:.|||||:      .|::....||.||||......|||||.|:.:..:|||:|:..|.|
 Frog   924 QAECSSEEINANYIDIRINREGYHRSNHFIATQGPKQDMIYDFWRMVWQEHVSSIVMITKLVEVG 988

  Fly  1378 REKCDQYWP--NDTVPVFYGDIKVQILNDSHYADWVMTEFMLCRGSEQR--ILRH----FHFTTW 1434
            |.||.:|||  :||    ||||:|.:||....|::.:....|    |:|  .:||    |||.:|
 Frog   989 RVKCSKYWPDTSDT----YGDIRVTLLNTETLAEYSVRTLTL----ERRGYTVRHEVKQFHFLSW 1045

  Fly  1435 PDFGVPNPPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGI 1499
            ||.|||.....|:.|:|..:.....:..|:|||||||.||:|.:|.||.:|........|||:..
 Frog  1046 PDHGVPYHATGLLAFIRRVKSSTPPDAGPVVVHCSAGAGRTGCYIVLDVMLDMAECEGVVDIYNC 1110

  Fly  1500 VYAMRKERVWMVQTEQQYICIHQCLL-AVLEGKENIVGPAREMHDNEGYEGQQVQLDENGDVVAT 1563
            |..:...|:.||||::||:.||..:| |.|.|...|  ||.:.  .:.|: :.:|:|...:    
 Frog  1111 VKTLCSRRINMVQTQEQYVFIHDAILEACLCGDTAI--PACDF--RQTYK-EMLQIDTQSN---- 1166

  Fly  1564 IEGHL--SHHDLQQAEAE-AIDDENAAILHDDQQPLTSSFTGHHTHMPPTTS----MSSFGGGGG 1621
             ..||  ....|....|: .:::.:.|:|..::....|...     :||..:    :|:.|....
 Frog  1167 -STHLRDEFQTLNSVTAQLGVEECSIALLPHNRDKNRSMDV-----LPPDRALPLLLSAHGEDTS 1225

  Fly  1622 GHTN---VDAPDRXHSVV----------------------------NQSDNNNSVVIVLVDNKPS 1655
            .:.|   .|:..|..:|:                            ||.:.:||....| ...|.
 Frog  1226 NYINAVLTDSYTRSSNVIITVHPLQNTITDFWRLVYDYGCSTVVMLNQLNQSNSAWPCL-QYWPD 1289

  Fly  1656 SMICK--------------------------------------------------DSKGGNIDVL 1670
            |.||:                                                  |||...:.:|
 Frog  1290 SGICRYGPMEVQFVSGSVEEDVVTRVFRVQNIARDEHLMVKHFQYLRWSPYRETPDSKRSFLQLL 1354

  Fly  1671 ESQQQQQQQQQQQPNQGGHNITTISAING 1699
            ...:|.|:|.::      |. |.:..:||
 Frog  1355 SLVEQWQEQNRE------HR-TLVHCLNG 1376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470 13/76 (17%)
fn3 961..1043 CDD:278470 23/90 (26%)
PTPc 1272..1525 CDD:214550 99/276 (36%)
PTPc 1298..1525 CDD:238006 90/240 (38%)
ptpruXP_012812827.1 MAM 27..183 CDD:366209
IG_like 192..278 CDD:214653
fn3 287..366 CDD:365830
fn3 490..568 CDD:365830 21/78 (27%)
PTP_DSP_cys 931..1141 CDD:391942 87/217 (40%)
PTP_DSP_cys 1227..1431 CDD:391942 24/158 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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