DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and Ptprv

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_149090.1 Gene:Ptprv / 64576 RGDID:621123 Length:1711 Species:Rattus norvegicus


Alignment Length:1915 Identity:461/1915 - (24%)
Similarity:722/1915 - (37%) Gaps:564/1915 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ADLAISIPNNPGLDDGASYRLDYSPPFGYPEPNTTIA----------SREIGDEIQFSRALPGTK 97
            |.|..|..:.||  |..||:|     ..|...:.|:|          |...||      .||||:
  Rat   143 ARLEASWSDAPG--DQDSYQL-----LLYHLESQTLACNVSVSPDTLSYSFGD------LLPGTQ 194

  Fly    98 YNFWLYYTNFTHHDWLTW--------TVTITTAPDPPSNLSVQVRSGKNAIILWSPPTQGSYTAF 154
            |..          :.:||        ::...|.|.||.:|:::.....:....|: .::|: |:|
  Rat   195 YVL----------EVITWAGSLHAKTSILQWTEPVPPDHLALRALGTSSLQAFWN-SSEGA-TSF 247

  Fly   155 KIKVLGLSEASSSYNRTFQVNDNTFQHSVKELTPGATYQVQAYTIYDGKESVAYTSRNFTTKPNT 219
            .   |.|::.....|.|..:......|:...|:||..:::: .....|...:...|....|.|:.
  Rat   248 H---LMLTDLLGGTNTTAVIRQGVSTHTFLHLSPGTPHELK-ICASAGPHQIWGPSATEWTYPSY 308

  Fly   220 PGKFIVW-FRNETTLLVLWQPPYPAGIYTH--YKVSIEPPDANDSVLYVEKEGEPPGPAQ--AAF 279
            |...::. .|||     || ..:.||:...  |.:.:..|..:.|.|         ||.:  |.|
  Rat   309 PSDLVLTPLRNE-----LW-ASWKAGLGARDGYVLKLSGPMESTSTL---------GPEECNAVF 358

  Fly   280 KGLVPGRAYNISVQTMSEDEISLPTTAQYRTVPLRPLNVTFDRDFITSNSFRVLWEAPKGISEFD 344
            .|.:|...|.:.::.::                 .|.:...:.....:.|..:..|.|......|
  Rat   359 PGPLPPGHYTLQLKVLA-----------------GPYDAWVEGSTWLAESAALPREVPGARLWLD 406

  Fly   345 KYQVSVATTRR----QSTVPRSNEPVAFFDFRDIAEP-GKTFNVIVKTVSG---KVTSWPATGDV 401
            ..:.|....||    ....|.|        ..:|:.| |.|..:....|.|   :|....:|||:
  Rat   407 GLEASKQPGRRALLYSDDAPGS--------LGNISVPSGATHVIFCGLVPGAHYRVDIASSTGDI 463

  Fly   402 T------LRPLPVRNLRSINDDKTNTMIITWEADPASTQDE-YRIVYHE--LETFNGDTSTLTTD 457
            :      ..|||.::|..|:....:.:.|.|  .||..|.| |::.:|:  .:...||...|..|
  Rat   464 SQSISGYTSPLPPQSLEVISRSSPSDLTIAW--GPAPGQLEGYKVTWHQDGSQRSPGDLVDLGPD 526

  Fly   458 RTRFTLESLLPGRNYSLSVQAVSKKMESNETSIFVVTRPSSPIIEDLKSIRMG-------LNISW 515
            ....||:||:||..|::|..|.:..::|:...|...|||:.|     .::.:|       |..||
  Rat   527 TLSLTLKSLVPGSCYTVSAWAWAGNLDSDSQKIHSCTRPAPP-----TNLSLGFAHQPAALKASW 586

  Fly   516 KSDVNSKQEQYEVLYSRNGTSDLRTQKTKESRLVIKNLQPGAGYELKVFAVSHDLRSEPHAYFQA 580
                          |...|..|                    .:.|:::.:              
  Rat   587 --------------YHPPGGRD--------------------AFHLRLYRL-------------- 603

  Fly   581 VYPNPPRNMTIETVRSNSVLVHWSPPESGEFTEYSIRYRTDSEQQWVRLPSVRSTEADITDMTKG 645
                  |.:|:|   |..||    |.|:..|:             |.:|             |.|
  Rat   604 ------RPLTLE---SEKVL----PREAQNFS-------------WAQL-------------TAG 629

  Fly   646 EKYTIQVNTVSFGVESPVPQEVNTTVPPNPVSNIIQLVDSRNITLEWPKPEGRVESYILKWWPSD 710
            .::.:|::|: :|.|...........||:..:.:       |:|                   ||
  Rat   630 CEFQVQLSTL-WGSERSSSANATGWTPPSAPTLV-------NVT-------------------SD 667

  Fly   711 NPGRVQTKNVSENKSADDLSTVRVLIGELMPGVQYKFDIQTTSYGILSGITSLY---PRTMPLIQ 772
            .|.::|            :|...|      ||.:.::.:            :||   .||...|.
  Rat   668 APTQLQ------------VSWAHV------PGGRSRYQV------------TLYQESTRTATSIM 702

  Fly   773 SDVVVANGEKEDERDTITLSYTPTPQSSSKFDIYRFSLGDAEIRDKEKLANDTDRKVTFTGLVPG 837
                   |.|||....:.|    ||.:..|.::..::                           |
  Rat   703 -------GPKEDGTSFLGL----TPGTKYKVEVISWA---------------------------G 729

  Fly   838 RLY----NITVWTVSGGVASLPIQRQDRLYP----EPITQLHATNITDTEISLRWDLPKGEYND- 893
            .||    |::.||                ||    |.:..:.|.:..   ::|.|  |.|.... 
  Rat   730 PLYTAAANVSAWT----------------YPLIPNELLVSMQAGSAV---VNLAW--PSGPLGQG 773

  Fly   894 ------FDIAYLTADN--LLAQNMTTRNEITISDLRPHRNYTFTVVVRSGTESSVLRSSSPLSAS 950
                  .|..:|:.:.  .|.|.:     ..:.||.|....:.:|..|:|          ||.||
  Rat   774 ACHAQLSDAGHLSWEQPLKLGQEL-----FMLRDLTPGHTISMSVRCRAG----------PLQAS 823

  Fly   951 FTTNEAV----PGRVERF--HPTDVQPSEINFEWSLPSSEANGVIRQFSIAYTNINNLTDAGMQD 1009
              |:..|    ||.||..  ||   :.:.:...|::|:.:.:       :....:..|...|...
  Rat   824 --THLVVLSVEPGPVEDVLCHP---EATYLALNWTMPAGDVD-------VCLVVVERLVPGGGTH 876

  Fly  1010 F-----ESEEAFGVIKNLKPGETYVFKIQAKTAIGFGPEREYRQTMPILA--------PPRPATQ 1061
            |     .|.:|. ::.||.|..:|...:..     .|....:.:.:.::.        ||..|. 
  Rat   877 FVFQVNTSGDAL-LLPNLMPTTSYRLSLTV-----LGRNSRWSRAVSLVCSTSAEAWHPPELAE- 934

  Fly  1062 VVPTEVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIVAEDDAKNASGLEMPS-------WLD--VQ 1117
              |.:| ...:.:.:...:..|...:||::.|.||     |.....|..||       |.|  .:
  Rat   935 --PPQV-ELGTGMGVTVMRGMFGKDDGQIQWYGII-----ATINMTLAQPSREAINYTWYDHYYR 991

  Fly  1118 SYSVWLPYQAIDPYYPFENRSVEDFT--IGTENCDNHKIGYCNGPLKSGTTYRVKVRAF----TG 1176
            ....:|.....:|:||........:|  :|||:|||.: ..|||.||||..||..|.||    |.
  Rat   992 GCESFLALLFPNPFYPEPWAGPRSWTVPVGTEDCDNTQ-EICNGRLKSGFQYRFSVVAFSRLNTP 1055

  Fly  1177 ADKFTDTAYSFPIQTDQDNTSLIVAITVPLTIIL-------VLLVTLLFYKRRRNNCRKTTKDSR 1234
            ......:|:|.|      ..|:.:|| :|||::|       |::..:|...|.|  |.|..:..:
  Rat  1056 ETILAFSAFSEP------RASISLAI-IPLTVMLGAVVGSIVIVCAVLCLLRWR--CLKGPRSEK 1111

  Fly  1235 ANDNMS---LPDSVIEQNRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCN 1296
              |..|   :|.::...:|||.|.:|.:.|...||.:...|.:||||||.||:|||...|:.|.|
  Rat  1112 --DGFSKELMPYNLWRTHRPIPIHSFRQSYEAKSAHAHQTFFQEFEELKEVGKDQPRLEAEHPDN 1174

  Fly  1297 RPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWE 1361
            ..|||:.::|||||||.:|..:..:..|||||||::||::..:|.|.|||||..|.:||||:.||
  Rat  1175 IIKNRYPHVLPYDHSRVRLTQLPGEPHSDYINANFIPGYSHTQEIIATQGPLKKTLEDFWRLVWE 1239

  Fly  1362 SNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEFMLCRGSE--QR 1424
            .....|:|||...|.||..|:.|||.::.||.:|.|.:.:|.:....:|...||.|..|:|  ||
  Rat  1240 QQVHVIIMLTVGMENGRVLCEHYWPANSTPVTHGHITIHLLAEEPEDEWTRREFQLQHGTEQKQR 1304

  Fly  1425 ILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQ--RPIVVHCSAGVGRSGTFITLDRILQQ 1487
            .::...||||||..||..|.:|:.||...::::.|.|  .||:|||||||||:|||:.|.|:|:|
  Rat  1305 RVKQLQFTTWPDHSVPEAPSSLLAFVELVQEQVQATQGKGPILVHCSAGVGRTGTFVALLRLLRQ 1369

  Fly  1488 INTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLL-AVLEG--KENIVGPAREMHDNEGYEG 1549
            :......|:|..||.:|..|..|:||..|||.:|.||| .:|||  ..:..||...|...:....
  Rat  1370 LEEEKVADVFNTVYILRLHRPLMIQTLSQYIFLHSCLLNKILEGPPDSSDSGPISVMDFAQACAK 1434

  Fly  1550 QQVQLDENGDVVATIEGHLSHHDLQQAEAEAIDDENAAILHDDQQPLTSSFTGHHTHMP------ 1608
            :....:         .|.|..:.|.:   :||.|...::|........|..:..|:...      
  Rat  1435 RAANAN---------AGFLKEYKLLK---QAIKDGTGSLLPPPDYNQNSIVSRRHSQEQFALVEE 1487

  Fly  1609 -PTTSM---SSFGGGGGG--H---TNVDAPDRXHSVVNQSDNNNSVVIVLVDNK----------- 1653
             |..||   |.|.||..|  |   |....|.. ..:|.:.|.:..|.:.|.|.|           
  Rat  1488 CPEDSMLEASLFPGGPSGCDHVVLTGSAGPKELWEMVWEHDAHVLVSLGLPDTKEKPPDIWPVEM 1552

  Fly  1654 ----------------------PSSMICKDSKGGNIDVLESQQQQQQQQQQQP-NQGGHN----- 1690
                                  ||::.       .:...||.:::|.|..|.| ::.|..     
  Rat  1553 QPIVTDMVTVHRVSESNTTTGWPSTLF-------RVIHGESGKERQVQCLQFPCSESGCELPANT 1610

  Fly  1691 -ITTISAINGY----------NTLQHRRK--SQLITF------------------------SSSS 1718
             :|.:.|:...          ..|.|..|  :||.||                        .|.:
  Rat  1611 LLTFLDAVGQCCFRGKSKKPGTLLSHSSKNTNQLGTFLAMEQLLQQAGTERTVDVFNVALKQSQA 1675

  Fly  1719 CDIKNSLSHEYI---NGSNGSAANGPPSSG 1745
            |.:......:||   |..|.:..||.|.:|
  Rat  1676 CGLMTPTLEQYIYLYNCLNSALLNGLPRAG 1705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 16/80 (20%)
fn3 220..304 CDD:278470 19/88 (22%)
fn3 315..391 CDD:278470 16/83 (19%)
FN3 405..494 CDD:238020 28/91 (31%)
FN3 511..574 CDD:238020 7/62 (11%)
FN3 583..671 CDD:238020 17/87 (20%)
fn3 683..753 CDD:278470 10/69 (14%)
fn3 787..850 CDD:278470 10/66 (15%)
fn3 866..935 CDD:278470 14/77 (18%)
fn3 961..1043 CDD:278470 16/88 (18%)
PTPc 1272..1525 CDD:214550 119/256 (46%)
PTPc 1298..1525 CDD:238006 104/230 (45%)
PtprvNP_149090.1 fn3 49..109 CDD:278470
fn3 131..201 CDD:278470 20/80 (25%)
FN3 473..547 CDD:214495 25/75 (33%)
FN3 656..>725 CDD:238020 24/135 (18%)
PTPc 1150..1408 CDD:214550 120/257 (47%)
PTPc 1177..1408 CDD:238006 105/230 (46%)
Substrate binding. /evidence=ECO:0000250 1350..1356 5/5 (100%)
PTPc <1521..1693 CDD:304379 29/178 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0791
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19134
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.880

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