DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ephb6

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_005173575.1 Gene:ephb6 / 572411 ZFINID:ZDB-GENE-100922-51 Length:1003 Species:Danio rerio


Alignment Length:195 Identity:50/195 - (25%)
Similarity:77/195 - (39%) Gaps:31/195 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   880 ISLRWDLPKGEYNDFDIAY----------------------LTADNLLAQNMTTRNEITISDLRP 922
            :||||..|.......|:.|                      .|.....:||...:..:|:.:|. 
Zfish   359 VSLRWRPPADMGGRTDVWYGVVCRICPSATSTPPSMCSWCGETVTYSPSQNGLKQTRVTLKNLL- 422

  Fly   923 HRNYTFTVVVRSGTESSVLRSSSPLSAS--FTTNEAVPGRVERFHPTDVQPSEINFEWSLPSSEA 985
             ...|:.:.|::..|.|.|....|..||  |||:::||..|...|........|...|..| ...
Zfish   423 -TRVTYLIQVQAMNEV
SALSPFPPQFASINFTTSQSVPSEVPMLHQLSRVQDSITLSWPQP-DRP 485

  Fly   986 NGVIRQFSIAYTNINNLTDAGMQDFESEEAFGVIKNLKPGETYVFKIQAKTAIGFGPEREYRQTM 1050
            ||.|.::.:.|.:..:..|:.:..: ||.....:..|.||..|.|:|:|:...||||   |..|:
Zfish   486 NGDILEYQLRYYDKGSDEDSALSMY-SETNTVTVTGLIPGSIYAFQIRARNERGFGP---YSHTI 546

  Fly  1051  1050
            Zfish   547  546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470 14/76 (18%)
fn3 961..1043 CDD:278470 22/81 (27%)
PTPc 1272..1525 CDD:214550
PTPc 1298..1525 CDD:238006
ephb6XP_005173575.1 Ephrin_lbd 22..212 CDD:279712
GCC2_GCC3 <286..321 CDD:285001
FN3 342..437 CDD:214495 14/79 (18%)
FN3 473..550 CDD:238020 23/79 (29%)
EphA2_TM <591..636 CDD:291255
PKc_like 636..905 CDD:304357
Pkinase_Tyr 641..901 CDD:285015
SAM 932..995 CDD:197735
SAM_superfamily 932..987 CDD:301707
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11636
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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