DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptprc

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_021325269.1 Gene:ptprc / 559154 ZFINID:ZDB-GENE-050208-585 Length:1229 Species:Danio rerio


Alignment Length:1422 Identity:310/1422 - (21%)
Similarity:518/1422 - (36%) Gaps:447/1422 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   534 GTSDLRTQKTKESRLVIKNLQPGAGYELKVFAVSHDLRSEPHAYFQAVYPNPPRNMTIETVRSNS 598
            |||.::|     |..:..:..|.:       |:|:: .|.|||          .|.|  .|.|..
Zfish    21 GTSPMQT-----SSNITTSKPPDS-------AISNN-SSIPHA----------DNST--KVSSGE 60

  Fly   599 VLVHWSPPESGEFTEYSIRYRTDSEQQWVRLPSVRSTEADITDMTKGEKYTIQV----NTVSFGV 659
            ........|:.|...|:|.:  :..:..:.:.|:.    |.|...|.:||.|::    .|:|.| 
Zfish    61 SYAGTGTTENQEKCRYNIIW--NENEAIINVSSIN----DKTSDHKNQKYRIELKQNNETISNG- 118

  Fly   660 ESPVPQEVNTTVP---PNPVSNIIQLVDSRNI----TLEWPKPEGRVESYILK----------WW 707
            .||:      |:|   ..|.:|....||:.::    :..:...|.::.:..|.          .|
Zfish   119 RSPL------TIPLKKVEPCTNYTIHVDNCSLQEKNSFHFNATESKIHTAKLHGDDQVCVEDGTW 177

  Fly   708 PSDNPGRVQTKNVSENK-----SADDLSTVRVLIGELMPGVQYKFDIQTTSYGILSGITSLYPRT 767
            .......::||:.....     .::...|:::.:..|.|.:||.                   .|
Zfish   178 NLTKCVNIETKDSCLQSPIVFIQSECTYTIKIHMPPLKPEIQYN-------------------ET 223

  Fly   768 MPLIQSDVVVANGEKEDERDTITLSYTPTPQSSSKFDIYRFSLGDAEIRDKEKLANDTDRKVTFT 832
            :|   :..|..|..||              .:.|.|:::         .|||......::.|.  
Zfish   224 IP---TKFVWENKPKE--------------CNESNFNVH---------CDKEISGFKVNQDVY-- 260

  Fly   833 GLVPGRLYNITVWTVSGGVASLPIQRQDRLYPEPITQLHATNITDTEISLRWDLPKGEYNDFDIA 897
             |:|.:.||.                                           :.|.|:||    
Zfish   261 -LIPSKKYNC-------------------------------------------IGKYEFND---- 277

  Fly   898 YLTADNLLAQNMTTRNEITISDLRPHRNYTFTVVVRSGTESS--VLRSSSPLSASFTTNEAVPGR 960
                  .::::..|  |||||  ...:|.|:   :::.|.||  ::.:.||       .|...| 
Zfish   278 ------TISESNNT--EITIS--CDWKNETY---IQNLTSSSFEIVWTLSP-------EEKCQG- 321

  Fly   961 VERFHPTDVQPSEINFEWSLPSSEANGVIRQ---------FSIAYTNINNLTDAGMQDFESEEAF 1016
                           .:|...|...|.|:::         .:.|:|::...||      .|....
Zfish   322 ---------------IKWEGFSGICNNVVQRKCQLVNDTTANCAFTDLKPFTD------YSCSLT 365

  Fly  1017 GVIKNLKPGETYVFKIQAKTAIGFGPEREYRQTMPILAPPRPATQVVPTEV---YRSSSTIQIRF 1078
            ..:|.|...:||...|:.||          :...||.    ..|.:..|::   |.:.::|.::.
Zfish   366 AKVKELGHFDTYKSFIEEKT----------KSFHPIF----NQTNLNTTDINQFYLTRNSIVVKC 416

  Fly  1079 RKNYFS-DQNGQVRMYTIIVAEDDAKNASGLEMPSWLDVQSYSVWLPYQAIDPYYPFENRSVEDF 1142
            :|...: |.||||..| |.:..::.|....:                          .||:...|
Zfish   417 KKKLETPDWNGQVGYY-IAILLNNGKTEQNI--------------------------TNRTSCTF 454

  Fly  1143 TIGTENCDNHKIGYCNGPLKSGTTYRVKVRAFTGADKFTDTAYSFPIQTDQDNTSLI----VAIT 1203
            ..  ||...|            |.|.:|:.|..  .:..:|..|..|.|..:..::|    ..|.
Zfish   455 LF--ENLSYH------------TNYIIKITARN--KEGNETTISASISTSYNEKAVIGFLAFLII 503

  Fly  1204 VPLTIILVLLVTLLFYKRRRNNCRKTTKDSRANDNMSLPDSVIEQNRPILIKNFAEHYRLMSADS 1268
            |....:|.:|..:...||:|         :...|.:.|... :.:..||......:.||...||.
Zfish   504 VTSVALLFVLYKIFLLKRKR---------TPEEDEICLTQP-LRRVEPIYPDGLIDAYRTKIADE 558

  Fly  1269 DFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGS--DYINANY 1331
            ...|.:||:.:..:..:.....|..|.|:.|||:.:|||||::|..|     ..||  |||||::
Zfish   559 SRLFMDEFQSIPRIFNNYTIKEAKRPENQSKNRYVDILPYDYNRVTL-----SSGSYGDYINASF 618

  Fly  1332 VPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWP-NDTVPVFYG 1395
            :.|:..|:::|..|||...|..|||:|.||..|..|||:|||.|..:.||.|||| .|.....:.
Zfish   619 IEGYQEPKKYIAAQGPKDETIVDFWQMMWEQKSSIIVMVTRCEEGNKVKCAQYWPCLDRETEIFD 683

  Fly  1396 DIKVQILNDSHYADWVMTEFMLCRGSE---QRILRHFHFTTWPDFGVPNPPQTLV---RFVRAFR 1454
            |..|:|..:.|..|:::...:|....|   :|.:.|..|.:|||.|||..|..|:   |.|.:|:
Zfish   684 DFVVKIKTEEHCPDYIIRHLVLANKREKASEREITHIQFISWPDHGVPTDPGQLLKLRRRVNSFK 748

  Fly  1455 DRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYIC 1519
            :....   ||||||||||||:||:|.:|.:::.:...:.|||:|.|..:|::|..|||.|.|||.
Zfish   749 NFFSG---PIVVHCSAGVGRTGTYIGIDAMIESLEAENRVDIYGFVAKLRRQRCLMVQVEAQYIL 810

  Fly  1520 IHQCLLAVLEGKENIVGPAREMHDNEGYEGQQVQLDENGDVVATIEGHLSHHDLQQAEAEAIDDE 1584
            ||..|:                 ::..:...::.|.|...|:.||.....:..:.:.|.:     
Zfish   811 IHTALI-----------------EHNQFGETEILLSEFHSVLNTIREKQGNESIMEIEFQ----- 853

  Fly  1585 NAAILHDDQQPLTSSFTGHHTHMPPTTSMSSFGGGGGGHTNVDAPDRXHSVVNQSDNNNSVVIVL 1649
                                 .:|...:..:...|.             |..|:..|.:|.||..
Zfish   854 ---------------------KLPKFKNWRTINTGS-------------SEENKDKNRDSKVIPY 884

  Fly  1650 VDNKPSSMICKDSKGGNIDVLESQQQQQQQQQQQPNQGGHNITTISAINGYNTLQHRRKSQLITF 1714
            ..|:   ::.:....||             |...|...                         |:
Zfish   885 DYNR---VLFRLDIAGN-------------QTSDPEDD-------------------------TY 908

  Fly  1715 SSSSCDIKNSLSHEYINGS--NG-------SAANGPPSSGSGSGSGPGSNRASRANVRLSFAEED 1770
            ||   |.:...|:||||.|  :|       .||.||..:.:.........:.::..|.|:..:||
Zfish   909 SS---DEEEEESNEYINASFLDGYWCQKSLIAAQGPLPNTTAEFLLMLYQQQTKTVVMLTDCQED 970

  Fly  1771 VMILPQNHSQQSNHQDDEVFTRRRSLLEVEIGVEVGEDGELAPHEMEEDLE-EEDEDEELYMHDE 1834
                  .....|.:..||    ::...::||.|:..|.   .|..::..|| :..:..|:...|:
Zfish   971 ------GKDLCSQYWGDE----KKVFGDMEIEVKKTES---FPTYVKRHLEIQSTKKNEILELDQ 1022

  Fly  1835 FETHIDTKSNNANDDS-----------GGGSYEDSH-------ALHSSLGGSNRNSL 1873
            :: .:..||:...:::           ..|.|::|.       .:|.| .||:|..|
Zfish  1023 YQ-FLKWKSSELPENAQELIEMIKNIRENGKYDNSKKNRSIPIVVHCS-NGSSRTGL 1077

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020 9/39 (23%)
FN3 583..671 CDD:238020 20/91 (22%)
fn3 683..753 CDD:278470 12/88 (14%)
fn3 787..850 CDD:278470 10/62 (16%)
fn3 866..935 CDD:278470 12/68 (18%)
fn3 961..1043 CDD:278470 16/90 (18%)
PTPc 1272..1525 CDD:214550 104/261 (40%)
PTPc 1298..1525 CDD:238006 98/235 (42%)
ptprcXP_021325269.1 FN3 395..476 CDD:214495 23/123 (19%)
PTPc 561..817 CDD:214550 105/280 (38%)
PTPc 874..1125 CDD:238006 51/263 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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