DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptprjb.2

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_021326227.1 Gene:ptprjb.2 / 558077 ZFINID:ZDB-GENE-131120-137 Length:263 Species:Danio rerio


Alignment Length:273 Identity:116/273 - (42%)
Similarity:155/273 - (56%) Gaps:30/273 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1309 DHSRFKL----QPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVM 1369
            |.||.||    .|.|     ||||||||||:||.:|||..||||..|.:.||||.||:....|||
Zfish     3 DASRVKLLKCENPFD-----DYINANYVPGYNSRKEFIAAQGPLPVTINKFWRMIWENKVYTIVM 62

  Fly  1370 LTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEFML--CRGSEQRILRHFHFT 1432
            ||:|.|.|:.||::|||::|  .||.:|.|...:::...||.:.:|.:  ....|...:|.||||
Zfish    63 LTKCNELGKVKCEKYWPSET--DFYHNISVTTTSETELDDWTIRDFSIKNVETEETCNVRQFHFT 125

  Fly  1433 TWPDFGVPNPPQTLVRFVRAFRDRIGAEQ--RPIVVHCSAGVGRSGTFITLDRILQQINTSDYVD 1495
            .|||.|||...:.|:.|....|:.:....  .|.||||||||||:||||.:|.::.||.....||
Zfish   126 AWPDHGVPETTEVLIEFRHLVREHMNQYSCTSPTVVHCSAGVGRTGTFIAIDHLISQIERDSMVD 190

  Fly  1496 IFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLEGKENIVGPAREMHDNEGYEG-------QQVQ 1553
            |:|||:.||..|..|||||.||:.::||...:::        :|.|.:|..|:.       |.|.
Zfish   191 IYGIVHDMRMHRALMVQTEDQYVYLYQCAYDLIQ--------SRTMSNNLIYQNTASFEIYQNVD 247

  Fly  1554 LDENGDVVATIEG 1566
            ..||.|.::..||
Zfish   248 FKENKDKMSFTEG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 105/223 (47%)
PTPc 1298..1525 CDD:238006 105/223 (47%)
ptprjb.2XP_021326227.1 PTPc 3..221 CDD:238006 105/224 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 1 1.000 - - FOG0001181
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106915
Panther 1 1.100 - - O PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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