DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptprq

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_021323628.1 Gene:ptprq / 555426 ZFINID:ZDB-GENE-050419-183 Length:2896 Species:Danio rerio


Alignment Length:1867 Identity:474/1867 - (25%)
Similarity:743/1867 - (39%) Gaps:457/1867 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LYQLSKATT------------RIRLKRQKAVPQHRWLWSLAFLAAFTLKDVRCADLAISIPNNP- 53
            |.|::..||            ::|:....||.:.. |.:..::...||:||         |::| 
Zfish  1118 LRQMTDTTTAVLTGLDKYSSYKVRVAASTAVGESP-LTNEDYIYVVTLEDV---------PDSPP 1172

  Fly    54 -GL----DDGASYRLDYSPPFGYPEPNTTIASREIG----------DEIQFSRAL----PGTKYN 99
             ||    ...::..|.:|||   .:||..|...||.          :....|..|    |.|.||
Zfish  1173 RGLTIVKTTSSTATLSWSPP---EKPNGIIRMYEISYTNGTYSNTVNSTSASATLRYLKPHTHYN 1234

  Fly   100 FWL-YYTNFTHHDWLTWTVTITTAPD----PPSNLSVQVRSGKNAIILWSPP--TQGSYTAFKIK 157
            ..: .:|...|.:.::.|:.:.:..|    ||.:||.:.....:..:.||||  ..|....:.::
Zfish  1235 VTVRAFTLLGHGEQISETLQMLSGEDVPGSPPYDLSYESIGSSSVNVSWSPPLLANGVILFYNVE 1299

  Fly   158 VLGLSEASSSYNRT----FQVNDNTFQHSVKELTPGATYQV----------QAYTIYDGKESVAY 208
            ..   .|:.|.|:|    :.|..|..:::...::..|..||          ...|:.||:..:.:
Zfish  1300 YW---NATQSLNQTTHMPYIVLSNLRKYAHYRISVQAATQVGMGNHTSEILNITTLEDGECLLCF 1361

  Fly   209 TSRNFTTKPNTPGKFIVWFR-NETTLLVLWQPPYPAG------IYTHYKVSIE-PPDANDSVLYV 265
            :.    |.|::|.||::..: ::|.:.:.|:.|..|.      |...:.:|.| ..:..::.:.|
Zfish  1362 SQ----TVPSSPPKFLIARKLSDTEVELSWEAPEEANSEILYYIVRVWNLSTEFVANVTETSVVV 1422

  Fly   266 EKEGEPPGPAQAAFKGLVPGRAYNISVQTMSE-DEISLPTTAQYRTVPLRPLNVTFD--RDFITS 327
            ..:|              ||: ||.||.:.:. .:..|.....:.|:...|.:...|  ...:|.
Zfish  1423 SVDG--------------PGQ-YNASVSSWTRLGDGGLLIYITFSTIESAPSDPPQDVVYTLLTI 1472

  Fly   328 NSFRVLW---EAPKGISEFDKYQVSVATTRRQSTVPRSNEPVAFFDFR----------------- 372
            ::.|:.|   ..|.||.::.....:...|.....||.|...:...|.:                 
Zfish  1473 STVRLSWRPPNEPNGIIQYYTIYYTDNNTEYTERVPGSEHQLLLSDLQAGQDYSVWMSSSTSVGD 1537

  Fly   373 -DIAEPGKTFNVI-----VKTVSGKV---TSWPATGDVTLRPL-------PVRNLRSINDDKTNT 421
             .:..|...|..:     ..::.|:.   |::|.  |.|.:.:       ||.|| |.....:..
Zfish  1538 GGLFSPSLNFTTLEDGQSPHSLRGEAQLCTTFPT--DYTSKKIALKLPSGPVHNL-SATIYSSTA 1599

  Fly   422 MIITWEADPASTQDEYRIVYHEL-------------ETFNGDTSTLTTDRTRFTLESLLPGRNYS 473
            ::|:|  ||....:..  ||::|             .|.| .|.|.||..|.:....|.....|.
Zfish  1600 VVISW--DPPLEPNGR--VYYQLSLQEAGITHPSINRTVN-MTITKTTTDTIYLFTKLRKYFPYI 1659

  Fly   474 LSV-QAVSKKMESNETSIFVVTR----PSSPII----EDLKSIRMGLNISWKSDVNSKQEQYEVL 529
            ::| .|.|.....|.|::..:..    ||||.:    ::|.|  ..:.:||...|.:..|..|..
Zfish  1660 INVTPATSAGSAVNHTTMLHLRTDEDVPSSPPLSGSNKNLSS--TSIQVSWFPPVEANGEIIEYA 1722

  Fly   530 YSRNGTSDLRTQKTKESRLVIKNLQPGAGYELKVFAVSHDLRSEP-----HAYFQAVYPNPPRNM 589
            .:..|.|......|.|:.||:..|.|...|.|.:.||:......|     |. .:|...:||||:
Zfish  1723 VNLQGPSTSNKNYTSETHLVLSELTPFTPYNLSIAAVTRVGTGPPVVLSLHT-DEAGPMSPPRNL 1786

  Fly   590 TIETVRSNSVLVHWSP-PESG-----------EFTEYSIRYRTDSEQQWVRLPSVRSTEADITDM 642
            ||....:|||.:.|.| ||..           |....|.||:..|:         .||:|::...
Zfish  1787 TIFNHTANSVWLQWEPSPEPNGVVQLYGFRILELNTDSFRYQNSSD---------ASTQAELGGF 1842

  Fly   643 TKGEKYTIQVNTVSFG-----VESPVPQEVNTTVPPNPVSNI-IQLVDSRNITLEWPKPE---GR 698
            .....|.|.|.|.:..     ...||....|.:| .:.|.|: ...:|..::.:||..|:   |.
Zfish  1843 KPHNSYEISVCTFTRAGNGDQYSLPVLFTTNESV-SDAVGNLSCSGLDWDSVYMEWELPDHPNGE 1906

  Fly   699 VESYILKWWPSDNPGR--VQTKNVSE-----NKSADDLSTVRVL----IGE-------------- 738
            :..|:::....::...  |.|..|:.     :..|..|.||..:    :||              
Zfish  1907 ILYYLIRSGDLEDEAHPVVLTHTVAHTLTGLSPHAFYLITVAAVNSAGVGEEANCSAHTPPESVV 1971

  Fly   739 LMPGVQY-KFDIQT--------------TSYGILSGITSLY------------PRTMP-----LI 771
            ...||.| .|::::              .|...||..:||:            |..:|     |.
Zfish  1972 HKKGVNYVPFNVESFQAVQNCFFFCDVLASQSFLSLHSSLHSQTQKIQHCFLSPSAVPGPSHSLT 2036

  Fly   772 QSDVVVANGEKEDERDTITLSYTPTPQSSSKFDIYRFSLGDAEIRDKEKLANDTDR--------- 827
            .:||.         .|::::|:............|...:        |:|:.:.:|         
Zfish  2037 VTDVT---------SDSVSVSWQRPVHVPGLLQGYNVEI--------EQLSRNCERQQQQVESCM 2084

  Fly   828 -------------KVTFTGLVPGRLYNITVWTVSGGVASLPIQRQDRLY-----------PEPIT 868
                         :.|.|.|:..|.|.|.|...:...|..|   .:.:|           |..|:
Zfish  2085 EAQILEWVEGETTRATLTSLLKYRQYRIRVVAFTRAGAGEP---SEWIYTQTLAGNPDAPPGAIS 2146

  Fly   869 QLHATNITDTEISLRWDLPK-----GEYNDFDIAYLTADNLLAQNMT-TRNE-----ITISDLRP 922
            .:.:.|    .:.:.||.|.     ..|    |..:||.:....|:| .|:.     :.:.:|..
Zfish  2147 VVPSAN----GLKIEWDKPSVISGPTSY----IIDITALDGSGYNITLVRHSEEIRTVIVGNLSA 2203

  Fly   923 HRNYTFTVVVRSGTESSVLRSSSPLSASFTTNEAVPGRVERFHPTD--------VQPSEIN--FE 977
            ...::.|:...:|..|:..|...       .:|.|..|.....|.|        |.|.|:.  :.
Zfish  2204 FTLHSVTITAFTGPLSNARRDGK-------ASEPVLIRTLEDEPKDPPKNVTLTVIPEEVTRVYV 2261

  Fly   978 WSLPSSEANGVIRQFSI-AYTNINNLTDAGMQDF----------ESEEAFGVIKNLKPGETYVFK 1031
            ...|..|.||.|..:.: .|.|       |..||          .:.....:|..||.|..|..:
Zfish  2262 TFSPPDEPNGNISAYRVDIYRN-------GQLDFFINSLSVISNPNNTMTAIIDGLKGGFNYSIR 2319

  Fly  1032 IQAKTAIGFGPEREYRQTMPILAPPRP----------ATQVVPTEVYRSSSTIQIRFRKNYFSDQ 1086
            |.|....||||..|...|..:.|||:|          |..::.|     |.||.|...:.:|:|.
Zfish  2320 IAAVNGAGFGPSSEVHVTTGVKAPPKPKKTPRAALNSAGVIIST-----SKTITIEMPECFFTDD 2379

  Fly  1087 NGQVRMYTIIVAEDDAKNASGLEMPSWLDVQSYSVW--------LPYQAIDPYYPFE-------- 1135
            :|.::...:||:|           |:.:|..:.|.|        .||...|.:...|        
Zfish  2380 HGPIQKVQVIVSE-----------PAVMDYGNLSNWKSVFLHPTAPYLTDDGFLNPECPKNSERM 2433

  Fly  1136 NRSVEDFTIG-TENC---DNHKIGYCNGPLKSGTTYRVKVRAFTGADKFTDTAYSFPIQTDQDNT 1196
            :.|.:.:.|| .|.|   |...:  ||||||..|.|..|.||.....:|||:.||..::|..|. 
Zfish  2434 SSSTKTYVIGEDEGCLSEDAETL--CNGPLKPKTHYVFKFRATNIRGQFTDSEYSDKVRTADDR- 2495

  Fly  1197 SLI-----VAITVPLTIILVLLVTLLFYKRRRNNCRK---------------------------- 1228
             |:     :.:.|.|:..|.|.:.|:.|...:.:.||                            
Zfish  2496 -LLTRDEQIILGVLLSFFLALFLILIIYGSVKIHRRKKEGGTYSPRQAEIIETKFKLDQLIAVAD 2559

  Fly  1229 -TTKDSRANDNMSLPDSVIEQNRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFAD 1292
             ..|:.:.|..:|...|:    :||..|:|.:|...:.|:.:.:|.|||.||..:.:|...:.||
Zfish  2560 LELKEEKINRLLSYRKSL----KPISKKSFLQHVEDLCANDNAKFQEEFAELPKLLQDLATSDAD 2620

  Fly  1293 LPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWR 1357
            ||.||.|||||||.||::||.||.......|||||||::|.|:..|.|||.|||||.||..||||
Zfish  2621 LPWNRSKNRFTNIKPYNNSRVKLLSEPGMPGSDYINASFVSGYLCPNEFIATQGPLPSTVADFWR 2685

  Fly  1358 MCWESNSRAIVMLTRCFEKGREKCDQYWPNDTVPV-FYGDIKVQILNDSHYADWVMTEFMLCRGS 1421
            |.||:.::.|||||:||||||.:|.||||.|..|| .:.||.:..|.:....||.:....:.|..
Zfish  2686 MIWETGTKTIVMLTQCFEKGRIRCHQYWPEDNKPVTVFADIIITKLTEDVRPDWTVRALKVERHG 2750

  Fly  1422 EQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQ 1486
            ...|:.||::|:||:.|||....|||:||:|.|...|.|...|||||||||||:|.||.||.::|
Zfish  2751 SYMIVHHFNYTSWPEHGVPESSSTLVQFVKAVRSNRGHENTTIVVHCSAGVGRTGVFIALDHLIQ 2815

  Fly  1487 QINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLEGKEN 1533
            .:...::|||:|:|..:|.||:.|||...||:.:||..|.:|..|.|
Zfish  2816 HLRDHEFVDIYGLVAELRSERMCMVQNLAQYMFLHQSTLDLLSAKGN 2862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 22/100 (22%)
fn3 220..304 CDD:278470 19/92 (21%)
fn3 315..391 CDD:278470 15/103 (15%)
FN3 405..494 CDD:238020 26/109 (24%)
FN3 511..574 CDD:238020 17/62 (27%)
FN3 583..671 CDD:238020 28/104 (27%)
fn3 683..753 CDD:278470 19/112 (17%)
fn3 787..850 CDD:278470 13/84 (15%)
fn3 866..935 CDD:278470 14/79 (18%)
fn3 961..1043 CDD:278470 25/102 (25%)
PTPc 1272..1525 CDD:214550 128/253 (51%)
PTPc 1298..1525 CDD:238006 115/227 (51%)
ptprqXP_021323628.1 fn3 209..278 CDD:306538
FN3 301..363 CDD:328772
FN3 382..470 CDD:238020
FN3 475..569 CDD:238020
FN3 723..808 CDD:238020
FN3 829..>864 CDD:238020
FN3 <1033..1067 CDD:238020
FN3 1072..1161 CDD:238020 8/43 (19%)
fn3 1170..1241 CDD:306538 18/73 (25%)
fn3 1264..1340 CDD:306538 18/78 (23%)
fn3 1368..>1410 CDD:306538 9/41 (22%)
FN3 1460..1549 CDD:238020 14/88 (16%)
FN3 1585..1670 CDD:214495 24/90 (27%)
FN3 1697..1768 CDD:238020 19/72 (26%)
FN3 1781..1872 CDD:238020 27/99 (27%)
fn3 1878..1958 CDD:306538 16/79 (20%)
FN3 2029..2133 CDD:238020 20/123 (16%)
FN3 2141..2235 CDD:238020 20/108 (19%)
FN3 2242..2338 CDD:238020 26/102 (25%)
UP_III_II 2354..>2491 CDD:297589 42/154 (27%)
PTPc 2599..2855 CDD:214550 128/255 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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