DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ephb2b

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_001314672.1 Gene:ephb2b / 554232 ZFINID:ZDB-GENE-050522-415 Length:989 Species:Danio rerio


Alignment Length:961 Identity:194/961 - (20%)
Similarity:308/961 - (32%) Gaps:314/961 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   626 WV--RLPSVRSTEADITDMTKGEK------YTIQVNTVSFGVESPVPQEVNTTVPPNPVSNIIQL 682
            |:  .||||.:.|..:.|.|....      |.:...:.|...|.....|...|:....|.|:...
Zfish     6 WILWTLPSVLAIEEILMDSTTATAELGWTVYPVSGTSDSSWEEVSGYDENMNTIRTYQVCNVFDA 70

  Fly   683 VDSRNITLEWPKPEG-------------------RV-----ESYILKWWPSD------------- 710
            ..:..:..::.:..|                   ||     |::.|.::.||             
Zfish    71 NQNNWVRTKYIRRRGAQRIHVEMKFSVRDCSSIPRVPGSCKETFNLYYYESDSDTATKTFPPWME 135

  Fly   711 NPG-RVQTKNVSENKSADDLSTVRVLIGELMPGVQYKFDIQTTSYGILS--GITSL---YPRTMP 769
            ||. :|.|....|:.|..||.      |.:|     |.:.:..|:|.:|  |....   |...|.
Zfish   136 NPWIKVDTIAADESFSQVDLG------GRVM-----KINTEVRSFGPVSRNGFYLAFQDYGGCMS 189

  Fly   770 LIQSDVVVANGEKEDERDTITLSYTPTPQSSSKFDIYRFSLGDAE-----------IRDKEKLAN 823
            ||                .:.:.|...|::.....|::.:|..||           |.:.|::  
Zfish   190 LI----------------AVRVFYRKCPRTIRNGAIFQETLSGAESTSLVAARGVCIPNAEEV-- 236

  Fly   824 DTDRKVTFTG----LVP-GR---------LYNITVW---------TVSGGVASL--PIQRQD--- 860
            |...|:...|    :|| ||         :.|.||.         |..|....|  ||..:.   
Zfish   237 DVPIKLYCNGDGEWMVPIGRCMCKAGHEAVENGTVCRACPSGFFKTAQGDEKCLQCPINSRTTND 301

  Fly   861 ------------RLYPEPI----------TQLHATNITDTEISLRWDLPKGEYNDFDIAYLTADN 903
                        |...:|:          .|...:::.:|.:.|.|:.|:......|:.|    |
Zfish   302 GATNCVCRNGYYRTDSDPLEMPCTTVPSAPQNVISSVNETSLMLEWNPPRETGGRDDVVY----N 362

  Fly   904 LLAQNM----------------------TTRNEITISDLRPHRNYTFTVVVRSGTESSVLRSSSP 946
            ::.::.                      .|.:.:.||||..|..|||.:...:|.......|...
Zfish   363 IICKSCGGGRGGCTRCGDNVQFIPRQLGLTESRVFISDLLAHTQYTFEIQAVNGVSDQSPYSPQY 427

  Fly   947 LSASFTTNEAVPGRVERFHPTDVQPSEINFEWSLPSSEANGVIRQFSIAYTNINNLTDAGMQDFE 1011
            .|.:.|||:|.|..|...|........|...||.| .:.||||..:.:.|.. .:.|:......:
Zfish   428 TSVNITTNQAAPSTVSIMHQVSRTIDSITLSWSQP-DQPNGVILDYELQYYE-KDQTEHNSSMVK 490

  Fly  1012 SEEAFGVIKNLKPGETYVFKIQAKTAIGFG-----------PEREY----RQTMPILAPPRPATQ 1061
            |:....||:.||||..|||:::|:|..|||           .|.||    ::.:|::.....|..
Zfish   491 SQTNTAVIRGLKPGGIYVFQVRARTVAGFGRYSGKMYFQTMTEEEYNTSIQEKLPLIIGSAAAGL 555

  Fly  1062 VVPTEVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIVAEDDAKNASGLEMPSWLDVQSYSVWLPYQ 1126
            |....|.........|..:...|:...:::.||           ||...|.   ::.|       
Zfish   556 VFLIAVVVIIIVCNRRGFERADSEYTDKLQHYT-----------SGHMSPG---MKIY------- 599

  Fly  1127 AIDPY-YPFENRSVEDFTIGTE-NC--DNHKIG------YCNGPLKSGTTYRVKVRAFTGADKFT 1181
             |||: |...|.:|.:|....: :|  ....||      .|:|.||......:.|...|....:|
Zfish   600 -IDPFTYEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGNLKLPGKREMFVAIKTLKSGYT 663

  Fly  1182 D-------TAYSFPIQTDQDNT---SLIVAITVPLTIILVLLVTLLFYKRRRNNCRKTTKDSRAN 1236
            :       :..|...|.|..|.   ..:|..:.|:.||...:                       
Zfish   664 EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFM----------------------- 705

  Fly  1237 DNMSLPDSVIEQN------------------------------RPILIKNFAEHYRLMSADSDFR 1271
            :|.|| ||.:.||                              |.:..:|...:..|:...|||.
Zfish   706 ENGSL-DSFLRQNDGQFTVIQLVGMLRGIASGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFG 769

  Fly  1272 FSEEFEE-------LKHVGRDQPCTFADLPCNRPKNRFTN--------ILPYDHSRFKLQPVDDD 1321
            .|...|:       ...:|...|..:. .|......:||:        |:.::...:..:|..|.
Zfish   770 LSRFLEDDTSDPTYTSALGGKIPIRWT-APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 833

  Fly  1322 EGSDYINA-----NYVPGHNSPREFIVTQGPLHSTRDDFWRMCWES--NSR 1365
            ...|.|||     ...|..:.|       ..||....|    ||:.  |:|
Zfish   834 TNQDVINAIEQDYRLPPPMDCP-------SALHQLMLD----CWQKDRNNR 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020 12/52 (23%)
fn3 683..753 CDD:278470 18/107 (17%)
fn3 787..850 CDD:278470 19/96 (20%)
fn3 866..935 CDD:278470 18/100 (18%)
fn3 961..1043 CDD:278470 27/92 (29%)
PTPc 1272..1525 CDD:214550 23/116 (20%)
PTPc 1298..1525 CDD:238006 18/83 (22%)
ephb2bNP_001314672.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11636
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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