DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptpn18

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_001013470.1 Gene:ptpn18 / 541324 ZFINID:ZDB-GENE-050320-12 Length:513 Species:Danio rerio


Alignment Length:509 Identity:144/509 - (28%)
Similarity:214/509 - (42%) Gaps:96/509 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1296 NRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCW 1360
            |..|||:.:|||||.:|..|.|...:..|||||||:|.|....|.:|.|||||.||..|||||.|
Zfish    56 NVKKNRYRDILPYDQTRVCLTPTTSEYQSDYINANFVKGAVRNRTYIATQGPLSSTVVDFWRMIW 120

  Fly  1361 ESNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEFML---CRGSE 1422
            :.|.:.|:|..|..|.|::||:.||.:.:.....|...|..|.:|...:.|:...::   |  .|
Zfish   121 QHNVKVIIMACREIEMGKKKCEVYWASTSDTSTLGPFTVSTLEESRPNEEVIVRTLVVNYC--DE 183

  Fly  1423 QRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQ 1487
            .|.:.||.:|.|||.|:|:.|..::..:...|.:.|.:..|:|:|||||.||:|....:|.:...
Zfish   184 ARKVSHFQYTAWPDHGIPDMPDGILGMMELARQKQGNQTDPVVIHCSAGCGRTGVICAVDYVNDL 248

  Fly  1488 INTSDYVDIFGI---VYAMRKERVWMVQTEQQYICIHQCLLAVLEGKENIVGPAREMHDNEGYEG 1549
            :.|....:.|.|   |..:|::|...|||::||..:...:..:.:       .|.||.       
Zfish   249 LLTEQIQEDFNILDLVLELRRQRPSAVQTKEQYGFVFHTVAQMFQ-------KALEMK------- 299

  Fly  1550 QQVQLDENGDVVATIEGHLSHHDLQQAEAEAIDDENAAILHDDQQPLTSSFTGHHTHMPPTTSM- 1613
                 :.|.|....|          .|....|..::|::     .|..:.....:.|:.|..|: 
Zfish   300 -----NMNADTSLYI----------NAVPPKISQKSASL-----APARAPAKTRNPHLKPRLSLP 344

  Fly  1614 -SSFGGGGG--GHTNVDAPDRX-HSV-------VNQSDNNNSVVIVLVDNKPSSMICKDSKGGNI 1667
             |:......  ..:.|.||:.. |||       .|....|||.|...|  ||        |...:
Zfish   345 QSTMNDTYAVINKSKVQAPNSAPHSVTVHFYDNANSEKTNNSAVYSTV--KP--------KTRPV 399

  Fly  1668 DVLESQQQQQQQQQQQPNQ-GGHNITTISAINGYNTL-----QHRRKSQ----------LITFSS 1716
            ..:.........:....|| ||.::..:.: :||..|     ...|.||          ..|.|.
Zfish   400 SAMPLSPSPIHDRPMPANQRGGLSLKKMES-DGYELLPGELRSMNRDSQPHGPPLSRSPSATESQ 463

  Fly  1717 SSCDIKNSLSHEYING--SNGSAANGPPSSGSGS----GSGPGS-----NRASR 1759
            ||.|.    .:||::.  .:||:...|.|.|..|    ..||..     :||.|
Zfish   464 SSTDD----DYEYVSSVVKDGSSPFAPGSLGFNSRIKKPKGPREPPAEWSRAER 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 87/234 (37%)
PTPc 1298..1525 CDD:238006 86/232 (37%)
ptpn18NP_001013470.1 Y_phosphatase 56..290 CDD:278528 87/235 (37%)
PTPc 58..290 CDD:238006 86/233 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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