DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp10D and PLCG1

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_005260495.1 Gene:PLCG1 / 5335 HGNCID:9065 Length:1330 Species:Homo sapiens


Alignment Length:1039 Identity:185/1039 - (17%)
Similarity:325/1039 - (31%) Gaps:352/1039 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   617 RYRTDSEQQWVRLPSVRSTEADITDMTKGEKYTIQVNTVSFGVESPVPQEVNTTVPPNPVSNIIQ 681
            ||:.|        |:.|..::....:..|.::.::    :..:::....|||..     :..:..
Human    92 RYQED--------PAFRPDQSHCFVILYGMEFRLK----TLSLQATSEDEVNMW-----IKGLTW 139

  Fly   682 LVDSRNITLEWPKPEGRVESYILKWWPSDNPGRVQTKNVSENKSADDLSTVRVLIGELMPGVQY- 745
            |::.   ||:.|.|. ::|.::.|.:.|.:      :|..:..||.||..:...:...:|.::: 
Human   140 LMED---TLQAPTPL-QIERWLRKQFYSVD------RNREDRISAKDLKNMLSQVNYRVPNMRFL 194

  Fly   746 ---KFDIQTTSYGILSG-ITSLY-------PRTM--PLIQSDVVVANGEKED-------ERDTIT 790
               ..|::..|..|..| ...||       .:||  |.:::..:.| ||:.:       |.....
Human   195 RERLTDLEQRSGDITYGQFAQLYRSLMYSAQKTMDLPFLEASTLRA-GERPELCRVSLPEFQQFL 258

  Fly   791 LSYTPTPQSSSKFDIYRFSLGDAE--IRDKEKLANDTDRKVTFTGLVPGRLYNITVWTVSGGVAS 853
            |.|.....:..:..:..|.|....  :|:.|:.....|..|||.......::|..:..|.....:
Human   259 LDYQGELWAVDRLQVQEFMLSFLRDPLREIEEPYFFLDEFVTFLFSKENSVWNSQLDAVCPDTMN 323

  Fly   854 LPIQRQDRLYPEPITQLHATNITDTEIS-----------LR----------WDLPKGEYNDFDIA 897
            .|:...      .|:..|.|.:|..:.|           ||          ||.|.|    ..:.
Human   324 NPLSHY------WISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDG----MPVI 378

  Fly   898 YLTADNLLAQNMTTRNEITISDLRPHRNYTFTVVVRSGTESSVLRSSSPLSASFTTNEAVP---G 959
            |        ...|...:|..||           |:.:..|.:.:.|..|:..|...:.::.   .
Human   379 Y--------HGHTLTTKIKFSD-----------VLHTIKEHAFVASEYPVILSIEDHCSIAQQRN 424

  Fly   960 RVERFHPT--D---VQPSEINFEWSLPSSEANGVIRQFSIAYTNINNLTDAGMQDFESEEAFGVI 1019
            ..:.|...  |   .:|.||:.: .|||  .|.:.|:..|.:                       
Human   425 MAQYFKKVLGDTLLTKPVEISAD-GLPS--PNQLKRKILIKH----------------------- 463

  Fly  1020 KNLKPGETYVFKIQAKTAIGFGPEREYRQTMPILAPPRPATQVVPTEVYRSSSTIQIRFRKNYFS 1084
            |.|..|..|                                :.|||.:..|.:.|.       .|
Human   464 KKLAEGSAY--------------------------------EEVPTSMMYSENDIS-------NS 489

  Fly  1085 DQNGQVRMYTIIVAEDDAKNASGLEMPSWLDVQSYSVWLPYQAI----DPYYPFENRS------- 1138
            .:||      |:..||...:.                |.|:..:    ..||..|..|       
Human   490 IKNG------ILYLEDPVNHE----------------WYPHYFVLTSSKIYYSEETSSDQGNEDE 532

  Fly  1139 --VEDFTIGTENCDNHKIGYCNGPLKSGTTYR-VKVRAFTGADKFTDTAYSFPIQTDQDNTSLIV 1200
              .::.:..||...|.|  :.:|.|.:|...| :..|..|          .:.|:|...:.|.:|
Human   533 EEPKEVSSSTELHSNEK--WFHGKLGAGRDGRHIAERLLT----------EYCIETGAPDGSFLV 585

  Fly  1201 AITVPLTIILVLLVTLLFYKRRR-NNCRKTTKDSRANDNMSLPDSVIEQNRPILIKNFAEHYRLM 1264
            ..:.    ..|...||.|::..: .:||..::.........|.|:::                  
Human   586 RESE----TFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLV------------------ 628

  Fly  1265 SADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINA 1329
                   |...::.:.|..:      ..|.||..:.|.:..:|..::.         |..::.:|
Human   629 -------FDSLYDLITHYQQ------VPLRCNEFEMRLSEPVPQTNAH---------ESKEWYHA 671

  Fly  1330 NYVPGHNSPREFIVTQGPLHSTRDDFW--RMCWESNSRAIVMLTRCFEKGREK-CDQYWPNDTVP 1391
            :..   .:..|.::.:.|    ||..:  |...|.||.||....    :|:.| |.......|  
Human   672 SLT---RAQAEHMLMRVP----RDGAFLVRKRNEPNSYAISFRA----EGKIKHCRVQQEGQT-- 723

  Fly  1392 VFYGDIKVQILND--SHYADWVMTEFMLCRGSEQRILRHFHFTTWPDFGV------------PNP 1442
            |..|:.:...|.|  |:|....:...|..|............|..||:|.            .||
Human   724 VMLGNSEFDSLVDLISYYEKHPLYRKMKLRYPINEEALEKIGTAEPDYGALYEGRNPGFYVEANP 788

  Fly  1443 PQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQIN-------TSDYVDIFGIV 1500
            ..|....|:|..|.....:..:            |||. ..|:|.:.       ..||..     
Human   789 MPTFKCAVKALFDYKAQREDEL------------TFIK-SAIIQNVEKQEGGWWRGDYGG----- 835

  Fly  1501 YAMRKERVWMVQTEQQYICIHQCLLAVLEGKENIVGPAREMHDNEGYEGQQVQLDEN---GDVV 1561
                |:::|.   ...|:             |.:|.|.       ..|.::..||||   ||::
Human   836 ----KKQLWF---PSNYV-------------EEMVNPV-------ALEPEREHLDENSPLGDLL 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020 9/53 (17%)
fn3 683..753 CDD:278470 14/73 (19%)
fn3 787..850 CDD:278470 12/64 (19%)
fn3 866..935 CDD:278470 17/89 (19%)
fn3 961..1043 CDD:278470 15/86 (17%)
PTPc 1272..1525 CDD:214550 51/276 (18%)
PTPc 1298..1525 CDD:238006 46/250 (18%)
PLCG1XP_005260495.1 PH_PLC_gamma 29..151 CDD:270168 13/78 (17%)
PH <71..142 CDD:278594 10/66 (15%)
PI-PLCc_gamma 319..>466 CDD:176534 34/201 (17%)
PH-like 489..>523 CDD:302622 10/55 (18%)
SH2_N-SH2_PLC_gamma_like 545..649 CDD:199829 25/150 (17%)
SH2_C-SH2_PLC_gamma_like 663..765 CDD:198186 24/123 (20%)
SH3_PLCgamma1 791..850 CDD:212903 15/96 (16%)
PHsplit_PLC_gamma <864..933 CDD:270054 4/9 (44%)
PLCYc 954..1069 CDD:128454
C2_PLC_like 1087..1250 CDD:175974
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.