DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and Eph

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster


Alignment Length:1260 Identity:216/1260 - (17%)
Similarity:387/1260 - (30%) Gaps:468/1260 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 TTLLVLWQPPYPAGIYTHYKVSIEPPDANDSVLYVE---------------KEGEPPGPAQAAFK 280
            |.||::        |..|:|::     ..|.|:.::               .:.:.||..:.:|.
  Fly    67 TILLII--------ISIHFKLA-----HADQVVLLDTTREATLEWTRYPYGPQAQTPGWVEESFT 118

  Fly   281 GLVPG---RAY--------NIS-------VQTMSEDEISLPTTAQYRTVPLRPLNV-----TFDR 322
            ..|.|   |:|        |::       :...|.:.:.:......|...|.|.|.     ||..
  Fly   119 DFVKGINWRSYVVCDVAYHNVNNWLWSPFIDRGSANRLYIEIQFTIRDCSLFPGNALSCKETFSL 183

  Fly   323 DFI------------TSNSFRVLWEAPKGISEFDK-YQVSVATTRRQSTVPRSNEPVAFFDFRDI 374
            .|.            .::|:|::.....|...|:: ..|.:.|..:...|   |:...:|.||| 
  Fly   184 LFYEFDAATREPPPWQTDSYRLIARIAAGEGRFNQNSDVDINTEVKSIAV---NKKGVYFAFRD- 244

  Fly   375 AEPGKTFNVIVKTVSGKVTSWPATGDVTLRPLPVRNLRSINDDKTNTMIITWEADPASTQDEYRI 439
              .|...:|:...|. .:|.          |....|....|:..|...|...|....:..|... 
  Fly   245 --QGACISVLAVKVY-YITC----------PAVTENFAHFNETPTGREITIIEKQNGTCVDNAE- 295

  Fly   440 VYHELETF--NGD--------------------TSTLTTDRTRFTLES--------LLPGRNYSL 474
             .:|..|:  .||                    |:...|:....|.:|        ..|..|.|.
  Fly   296 -PYETPTYLCKGDGKWTILTGGCRCKAGYEPNYTNKTCTECPLGTFKSPEVTKCTPCPPNSNASK 359

  Fly   475 SVQAVSK---------------------KMESNETSIFV-----VTRPSSPIIEDLKSIRMGLNI 513
            :.....|                     ...:|.|.:||     :...|:|          ..|.
  Fly   360 TGSPFCKCASGFYRHPNDGRHMPCYSPPAAPTNLTLLFVDQTSAIISWSAP----------AKNE 414

  Fly   514 SWKSDVNSKQEQYEVLY-------SRNGTSDLRTQKTKESRLVIKNLQPGAGYELKVFA---VSH 568
            |:.|:.|||....:::|       |.|...:..|....|:::.:.||:|...|.:::.|   |||
  Fly   415 SFSSETNSKIYHSDIVYKIKCNICSPNVVYNPSTDTFNETKITLTNLEPVTTYTVQIHAINSVSH 479

  Fly   569 DLRSEPHAYFQAVYPNPPRNMTI-ETVRSNSVLVHWSPPESGEFTEYSIRYRTDSEQQWVRLPSV 632
            ....:.|:       |....:.: :.|.||:.|:: .|.:..|                     |
  Fly   480 INEFKRHS-------NESSLVAVSDIVFSNTSLLN-IPLDLNE---------------------V 515

  Fly   633 RSTEADITDMTKGEKYTIQVNTVSFGVESPVPQEVNTTVPPNPVSNIIQLVDSRNITLEWPKP-- 695
            ::.:|:|...|:    ::.::|| |.:.                   |..:.:::..|||.||  
  Fly   516 KTGQAEIVFTTE----SVLLSTV-FNLR-------------------ILAITNKDADLEWDKPVQ 556

  Fly   696 -EGRVESYILKWWPSDNPGRVQTKNVSENKSADDLSTVRVLIGELMPGVQYKFDIQ-TTSYGILS 758
             :..:|.|.::|:|     :|:...:  ||||.:....:..|..|:...:|.|.:: .|:.|..|
  Fly   557 SDFPLEFYEVRWFP-----KVELDAI--NKSALNTKETKAHIVGLLENTEYGFQVRCKTNNGFGS 614

  Fly   759 GITSLYPRTMPLIQS----------------------------DVVVANGEKEDERDTITLSYTP 795
            ....:|.:|:..:.|                            .|.....:.:|:.|..:.::.|
  Fly   615 YSNMIYAQTLQSVGSVYDDSVQIRFIAGAIVTGVLFLVIFIIATVYFMRSKHQDDLDKKSTNHLP 679

  Fly   796 TPQSSSKFDIYRFSLGDAEIRDKEKLANDTDRKVTFTGLVPGRLYNITVWTVSGGVASLPIQRQD 860
            .|...:..::                 |..|.    |.:|.....|:|.          |:....
  Fly   680 LPLDYASNEV-----------------NSMDT----TPIVKKLHLNVTT----------PLFGNS 713

  Fly   861 RLYPEPIT--------QLHATNITDTEISLRWDLPKGEYNDFDIAYLTADNLLAQNMTTRNEITI 917
            |.|.:|.|        :..|..|....|::...:..||:.|.....|.    :..|.....::.|
  Fly   714 RSYVDPHTYEDPNQAIREFAREIDANYITIEAIIGGGEFGDVCRGRLK----IPPNFVQDIDVAI 774

  Fly   918 SDLRPHRNYTFTVVVRSGTESSVLRSSSPLSASFTTNEAVPGRVERFHP---------TDVQPSE 973
            ..|:|                   .||......|.|..::.|:.:  ||         |...|..
  Fly   775 KTLKP-------------------GSSEKARCDFLTEASIMGQFD--HPNVIYLQGVVTRSNPVM 818

  Fly   974 INFEWSLPSSEANGVIRQFSIAYTNINNLTDAGMQDFESEEAFGVIKNLKPGETYVF-------K 1031
            |..|:.     .||.:..|    ..:|:      ..|::.:...:::.:..|.:|:.       .
  Fly   819 IITEYM-----ENGSLDTF----LRVND------GKFQTLQLIVMLRGIASGMSYLSDMNYVHRD 868

  Fly  1032 IQAKTAI----------GFGPEREYRQTMPILAPPRPATQVVPTE----VYRSSSTIQIRFRKNY 1082
            :.|:..:          .||..||...          |:....|.    ..|.::...|.|||  
  Fly   869 LAARNVLVNAQLICKIADFGLSREIEN----------ASDAYTTRGGKIPVRWTAPEAIAFRK-- 921

  Fly  1083 FSDQNGQVRMYTIIVAEDDAKNASGLEMPSWLDVQSYSVWLPYQAIDPYYPFENRSVEDFTIGTE 1147
            |:..: .|..|.:::               | :|.||..       .||:.:.|:.|        
  Fly   922 FTSAS-DVWSYGVVL---------------W-EVMSYGE-------RPYWNWSNQDV-------- 954

  Fly  1148 NCDNHKIGYCNGPLKSGTTYRVKVRAFTGADKFTDTAYSFPIQTDQDNTSLIVAITVPLTIILVL 1212
                         :||                 .:..|..|...|           .|..:..::
  Fly   955 -------------IKS-----------------IEKGYRLPAPMD-----------CPEALYQLM 978

  Fly  1213 L----------------VTLLFYKRRRNNCRKTTKDSRANDNMSLPDSVIEQNRPILIKNFAEHY 1261
            |                |:.|....|:.....||:.|..:|...:.|....||..|....:.||.
  Fly   979 LDCWQKQRTHRPTFASIVSTLDNLARQPQSLLTTRPSPESDGNHILDGQRGQNIFISTDLWLEHI 1043

  Fly  1262 RLMSADSDFRFSEEFEELKHVGRDQ 1286
            ::.      |:...|:|...:...|
  Fly  1044 KMS------RYCHHFKEANLINAQQ 1062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470 17/105 (16%)
fn3 315..391 CDD:278470 20/93 (22%)
FN3 405..494 CDD:238020 23/144 (16%)
FN3 511..574 CDD:238020 19/72 (26%)
FN3 583..671 CDD:238020 14/88 (16%)
fn3 683..753 CDD:278470 18/73 (25%)
fn3 787..850 CDD:278470 9/62 (15%)
fn3 866..935 CDD:278470 13/76 (17%)
fn3 961..1043 CDD:278470 16/107 (15%)
PTPc 1272..1525 CDD:214550 3/15 (20%)
PTPc 1298..1525 CDD:238006
EphNP_524625.3 EphR_LBD 85..260 CDD:198439 32/181 (18%)
FN3 387..476 CDD:238020 22/98 (22%)
FN3 536..623 CDD:238020 23/112 (21%)
EphA2_TM 644..736 CDD:291255 17/122 (14%)
PTKc_EphR 736..1002 CDD:270629 60/390 (15%)
Pkinase_Tyr 741..999 CDD:285015 58/382 (15%)
SAM_1 1033..1092 CDD:278937 7/36 (19%)
SAM 1039..1092 CDD:197735 6/30 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11636
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.000

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