DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and Ptp99A

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster


Alignment Length:1491 Identity:344/1491 - (23%)
Similarity:552/1491 - (37%) Gaps:432/1491 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   629 LPSVRSTEA----DITDM-------TKGEKYTIQ---VNTVSFGVESPVPQEVNTTVP------P 673
            |.::.:|:|    |:|::       ..|:..||.   ||..|. |::.|.:..:||:.      |
  Fly    26 LATLPATQAGRIFDVTNLDYVKVNAEAGKNVTIPCPGVNEHSL-VDTLVWKTASTTIAQFANRIP 89

  Fly   674 NPVSNIIQLVDSRNITLEW-PKPEGRVESYILKWWPSDNPGRVQTKNVSENKSADDLSTVRVLIG 737
            ...|..|||: |.|..|:: |........||.         .|..:::.|       :.|.:|:.
  Fly    90 LLHSPRIQLL-SDNFGLQFSPSLASDTSEYIC---------LVNDRHIPE-------AIVDLLVQ 137

  Fly   738 ELMPGVQYKFDIQTTSYGI-LSGITSLYPRTMPLIQSDVVVANGEKEDE-RDTITLSYTPTPQSS 800
            ::....:....|..||..: ||...|.:||..|:  :..::...|.||. .:.:...||.|..:|
  Fly   138 DVPDPPERPLLISFTSRSVNLSWAHSQHPRNAPV--THFIIETREGEDGIWEQLARIYTKTNATS 200

  Fly   801 ------SKFDIYRFSLGDAEIRDKEKLANDTDRKVTFTGLVPGRLYNITVWTVSGGVASLPIQRQ 859
                  :.|.:|.|.|          ||      |...|:.|....:..:.|:.......||   
  Fly   201 YQVTGLTPFTVYSFRL----------LA------VNKLGISPPSKESYYIVTLREAPTGKPI--- 246

  Fly   860 DRLYPEPITQLHATNITDTEISLRWDLPK-----GEYNDFDIAYLTADN--------LLAQNMTT 911
                  |.|   |.|.:.|.:.:.|..|.     ||:..:.|.|...|.        .:..|...
  Fly   247 ------PTT---AHNTSSTSVYISWKAPPPDTILGEFLGYRITYRPRDRDPNDTKEIYIRDNTVE 302

  Fly   912 RNEITISDLRPHRNYTFTVVVRS----GTESSVLRSSSPLSASFTTNEAVPGRVERFHPTDVQPS 972
            .:|  |.:|:.:..|..||.|.:    |.|:::|         ..|:|.||.:.:.....||..:
  Fly   303 SHE--IQNLQTYTQYKVTVQVFNPEGLGPETTIL---------VMTDEGVPSKPQNLTILDVSAN 356

  Fly   973 EINFEWSLPSSEANGVIRQFSIAYTNINNLTDAGMQ-------------DFESEEAFGVIKNLKP 1024
            .|...|..|.:: ||.|..:.:.:.:.|   ..|::             .||       ::||:|
  Fly   357 SITMSWHPPKNQ-NGAIAGYHVFHIHDN---QTGVEIVKNSRNSVETLIHFE-------LQNLRP 410

  Fly  1025 GETYVFKIQAKTAIGFG-PEREYRQTMPILAPPRPATQVVPTEVYRSSSTIQIRFRKNYFSDQNG 1088
            ...|...::|.|....| |..:..|...:..|..||   :......|..:|.||:|:.|  :...
  Fly   411 YTDYRVIVKAFTTKNEGEPSDQIAQRTDVGGPSAPA---IVNLTCHSQESITIRWRRPY--EFYN 470

  Fly  1089 QVRMYTI---IVAEDDAK----NASGLEMPSWLDVQSYSVWLPYQAIDPYYPFENRSVEDFTIGT 1146
            .:..|.|   :..:|..:    |||..|:.:.:.:|:                            
  Fly   471 TIDFYIIKTRLAGQDTHRDIRINASAKELETAMILQN---------------------------- 507

  Fly  1147 ENCDNHKIGYCNGPLKSGTTYRVKVRAFTGA---------DKFTDTAY---------SFPI--QT 1191
                          |.:.:.|.|||.|.|.:         .||:::..         ..|:  |:
  Fly   508 --------------LTTNSYYEVKVAAATFSVINPKKIVLGKFSESRIIQLQPNCEKLQPLLRQS 558

  Fly  1192 DQD-NTSLIVAITVP-LTIILVLLVTLLFYKRRRNNCRKTTKDSRANDN-----MSLPDSVIEQN 1249
            ..| |.:::|.|... ..|||:::...|:.::..:.......|...:.|     ..:|..:.::.
  Fly   559 HNDYNLAVLVGIIFSCFGIILIIMAFFLWSRKCFHAAYYYLDDPPHHPNAPQVDWEVPVKIGDEI 623

  Fly  1250 R-PILIKNFAEHYRLMSADSDFRFSEEFEELKH--VGRDQPCTFADLPCNRPKNRFTNILPYDHS 1311
            | .:.:..||:|...:.||.|..||.|:|.:::  :..|.||..:..|.|:.|||:.||..||||
  Fly   624 RAAVPVNEFAKHVASLHADGDIGFSREYEAIQNECISDDLPCEHSQHPENKRKNRYLNITAYDHS 688

  Fly  1312 RFKLQPVDDDEGS-DYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFE 1375
            |..|.|....:.: ||||||::.|:.....||.|||||..|.|.||||.||.....|||:|...|
  Fly   689 RVHLHPTPGQKKNLDYINANFIDGYQKGHAFIGTQGPLPDTFDCFWRMIWEQRVAIIVMITNLVE 753

  Fly  1376 KGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEFML----------CRGSEQRILRHFH 1430
            :||.|||.|||.|.|.. ||.|:|:::.:...:.:.:....:          |  :.::::..:|
  Fly   754 RGRRKCDMYWPKDGVET-YGVIQVKLIEEEVMSTYTVRTLQIKHLKLKKKKQC--NTEKLVYQYH 815

  Fly  1431 FTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVD 1495
            :|.|||.|.|:.|..::.||:.......||..||||||||||||:||:|.||.:|:||...:.|:
  Fly   816 YTNWPDHGTPDHPLPVLNFVKKSSAANPAEAGPIVVHCSAGVGRTGTYIVLDAMLKQIQQKNIVN 880

  Fly  1496 IFGIVYAMRKERVWMVQTEQQYICIHQCLL-AVLEGKENIVGPAREMHDN------EGYEG---- 1549
            :||.:..:|.:|.::||||:|||.:|..|: |:..|:.|::....|...|      :.|:.    
  Fly   881 VFGFLRHIRAQRNFLVQTEEQYIFLHDALVEAIASGETNLMAEQVEELKNCTPYLEQQYKNIIQF 945

  Fly  1550 -----------QQVQLDENGDVVATIEGHLSHHDLQQAEAEAIDDENAAILHDDQQPLTSSFTGH 1603
                       :||...:|...:..|||...|...:..| :..|..||:.||..::......|.|
  Fly   946 QPKDIHIASAMKQVNSIKNRGAIFPIEGSRVHLTPKPGE-DGSDYINASWLHGFRRLRDFIVTQH 1009

  Fly  1604 ---HT----------HMPPTTSMSSFGGGGGGHTNVDA-------PDRXHSV------------V 1636
               ||          |...|..:.|         ::|.       ||....:            .
  Fly  1010 PMAHTIKDFWQMVWDHNAQTVVLLS---------SLDDINFAQFWPDEATPIESDHYRVKFLNKT 1065

  Fly  1637 NQSD-------------------------------NNNSVVIVLVDNKPSSMICKDSKGGNIDVL 1670
            |:||                               |.||:...:||....   |.|.:.|.|.::
  Fly  1066 NKSDYVSRDFVIQSIQDDYELTVKMLHCPSWPEMSNPNSIYDFIVDVHER---CNDYRNGPIVIV 1127

  Fly  1671 ESQQQQQQQQQQQPNQGGHNITTISAING---------------YNTLQHRRKSQLITFSSSSCD 1720
            :             ..||....|..||:.               |..|.|.::..:.|.|.....
  Fly  1128 D-------------RYGGAQACTFCAISSLAIEMEYCSTANVYQYAKLYHNKRPGVWTSSEDIRV 1179

  Fly  1721 IKNSLSHEYING-----------------------------------SNGSAANGPP-------- 1742
            |.|.||  ::.|                                   |:.|:...||        
  Fly  1180 IYNILS--FLPGNLNLLKRTALRTEFEDVTTATPDLYSKICSNVAPLSSSSSTTPPPPSTPTPQP 1242

  Fly  1743 ------SSGSGSG-----SGPGSNRASRANVRLSFAEEDVM---------ILPQNHSQQSNHQDD 1787
                  ||.|.|.     |...:|..|.|...........|         .:|...||.|     
  Fly  1243 PQTIQLSSHSPSDLSHQISSTVANAGSPATASAGATPTTPMTPTVPPTIPTIPSLASQNS----- 1302

  Fly  1788 EVFTRRRSLLEVEIGVEVGEDGELAPHEMEEDLEEEDEDEELYMHDEFETHIDTKSNNAND 1848
                  .:|.............:|..|:.::.|....:..:|  ..::.||.....||..|
  Fly  1303 ------LTLTNANFHTVTNNAADLMEHQQQQMLALMQQQTQL--QQQYNTHPQQHHNNVGD 1355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020 14/55 (25%)
fn3 683..753 CDD:278470 11/70 (16%)
fn3 787..850 CDD:278470 14/68 (21%)
fn3 866..935 CDD:278470 20/85 (24%)
fn3 961..1043 CDD:278470 19/95 (20%)
PTPc 1272..1525 CDD:214550 108/265 (41%)
PTPc 1298..1525 CDD:238006 99/237 (42%)
Ptp99ANP_651691.4 FN3 140..236 CDD:238020 25/113 (22%)
fn3 249..331 CDD:278470 20/86 (23%)
FN3 342..437 CDD:238020 22/105 (21%)
FN3 442..520 CDD:238020 22/124 (18%)
PTPc 646..911 CDD:214550 109/267 (41%)
PTPc 676..911 CDD:238006 100/237 (42%)
PTPc 935..1186 CDD:214550 50/278 (18%)
PTPc 963..1169 CDD:238006 41/231 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 163 1.000 Domainoid score I1235
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46470
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.010

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