DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptpro

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_001077283.1 Gene:ptpro / 407676 ZFINID:ZDB-GENE-070424-54 Length:1238 Species:Danio rerio


Alignment Length:1454 Identity:353/1454 - (24%)
Similarity:567/1454 - (38%) Gaps:403/1454 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 HSVKE-LTPGATYQVQAYTI---YDGKESVAYTSRNFTTKPNTPGKFIVW-FRNETTLLVLWQPP 240
            |::.| |...|:|....|:|   .||:   .:|:|:..|:|.......:| :.......|::|..
Zfish    70 HTLPEPLLFNASYHGLLYSISLMTDGR---THTTRSIITQPLPLDSVEMWDYAPSPETAVVFQIR 131

  Fly   241 YP-AGIYTHYKVSIEPPDANDSVLYVE-KEGEPPGPAQAAFKGLVPGRAY-NISVQTMSEDEIS- 301
            .| ..|:|...:|.........:||.: ..|      :..||..:.|..| ||:.|.:||..:: 
Zfish   132 SPDRNIFTRVNISYTEGHQRRYMLYKDFLHG------KTVFKHWLSGVCYSNITFQLISEASVNR 190

  Fly   302 ---------LPTTAQYRTVPLRPLNVTFDRDFITSNSFRVLWEAPKG------ISEFDKYQVSVA 351
                     .....|:||||..||||          |.::|..:.:|      .....|...:.:
Zfish   191 SALLSRSDITHNPQQHRTVPNPPLNV----------SLKILHLSGRGPPGPVLTGAILKNSHNAS 245

  Fly   352 TTRRQSTVPRSNEPVAFFDFRDIAEPGKTFNVIVKTVS-GKVTSWPATGDVTLRPLPVRNLRSIN 415
            ..||:..:|...|.....|..: .|...|...:.::.| .:..|.|.|.:.||            
Zfish   246 VVRRERDLPEYEEQEPTSDTLN-TESNLTHTQLNQSESENESESEPVTAEPTL------------ 297

  Fly   416 DDKTNTMIITWE-ADPASTQDE----YRIVYHELETFNGDTSTLTTDRTRFTLE-SLLPGRNYSL 474
             :.:...:..|: ..||.|::|    ...:..|.|..|...|.|     ...|| :::|.     
Zfish   298 -NSSTQSLWAWQTVSPAPTEEEEEGFVNALVPEYEDSNEPGSAL-----GIPLEPAVMPA----- 351

  Fly   475 SVQAVSKKMESNETSIFVVTRPSSPIIEDLKSIRMGLNISWKSDV-NSKQEQYEVLYSRNGTSDL 538
                             |:..|.:|::         |.:.|.... ::..:.:.:...|||.|..
Zfish   352 -----------------VMPTPLAPVL---------LQLRWSPPAPHTAYDAFNIYIYRNGNSTE 390

  Fly   539 RTQKTKESRLVIKNLQPGAGYELKVFAVS-----HDLRSEPHAYFQAVYPNP-----------PR 587
            .....:.:...:..|.....|.:.|..:|     ....|..:..| ..|.:|           |:
Zfish   391 TATVDENTHEFLAELSESGTYRIHVTTLSSAGDCEARESSANTAF-TFYLSPSGEWMEQPQERPQ 454

  Fly   588 NMTIETVRSNSVLVHWSPPE---SGEFTEYSIRYRT-----DSEQQWVRLPSVRSTEAD-ITDMT 643
            .::::.:.|::..|.|:|..   :|..  .|::..|     .|::..:...|..:..:| |:.:|
Zfish   455 AVSVKMLDSSTAAVSWAPSTHTYNGSL--ISVQSLTCLRPSISQRMELNYCSEENITSDIISSLT 517

  Fly   644 KGEKYTIQVNTVSFGVESPVPQEVNTTVPPNPVSN-IIQLVDSRNITLEWPKPEG-RVESYILKW 706
            .|.:|.:.|...:..:.||..:.|...:.|..|.: ::..:....:.|.|.:|.. ....|:|:.
Zfish   518 PGAQYRVVVYHTNGPLVSPASEPVIIDIEPTGVRDLVVYPLSPSAVILSWQRPYNVAFRKYVLQT 582

  Fly   707 WPSDNPGRVQTKNVSE----NKSADDLSTVRVLIGELMPGVQYKFDIQTTSYGILSGITSLYPRT 767
            :..::  ..||...|.    ..:|..:::|||.  :|:|...|.|.:...::|           .
Zfish   583 FFFNS--ATQTAQWSTYYEIAATASVIASVRVT--DLLPAWFYNFRVTMVTWG-----------D 632

  Fly   768 MPLIQSDVVVANGEKEDERDTITLSYTPTPQ----SSSKFD----IYRFSLGD------------ 812
            .||...             ||.|:|:...|:    ||.:|.    ..|::.||            
Zfish   633 PPLSCC-------------DTSTVSFITAPEAPHISSVEFSHGSVFVRWTYGDLFTDLTHSRMLH 684

  Fly   813 ----AEIRD--KEKLANDTDRKVTFTGLV--PGRLYNITVWTVSGGVASLPIQRQDRLYPEPITQ 869
                ||.:.  :.:.:.|..|.|....|.  .|.:||:||...:....:.......:|.|.|...
Zfish   685 WQVVAEGKKSARRRFSVDVTRSVMKASLALPAGDIYNLTVTACTERSCNTSAPHIMKLDPAPPRS 749

  Fly   870 LHATNITDTEISLRWDLPKGEYNDFDI------AYLTADNLLAQNMTTRNEITISDLRPHRNYTF 928
            |:|.|.:||.::|.| ..:|..:.:.|      |:.....:....:|:.:.:|:|.|:  .:.|:
Zfish   750 LYAVNASDTSVTLIW-AEEGVVDHYLITCRALGAHAEQKKVREPLVTSAHVLTVSGLQ--ASTTY 811

  Fly   929 TVVVRSGTESSVLRSSSPLSASFTTNEAVPGRVERFHPTDVQPSEINFEWSLPSSEANGVIRQFS 993
            ...|||.:.||   ||.|:..:.:|.                ..|:|     ||..|...:...|
Zfish   812 NCSVRSSSYSS---SSDPVHITVSTT----------------VREMN-----PSVAAISALAVLS 852

  Fly   994 IAYTNINNLTDAGMQDFESEEAFGVIKNLKPGETYVFKIQAKTAIGFGPEREYRQTMPILAPPRP 1058
            :...::..|                                                        
Zfish   853 VLLISLLVL-------------------------------------------------------- 861

  Fly  1059 ATQVVPTEVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIVAEDDAKNASGLEMPSWLDVQSYSVWL 1123
                         ..:.:|.:....|.:.|..........|.|.|                   |
Zfish   862 -------------FLLVLRKKHMELSRECGAETFVNFASFERDGK-------------------L 894

  Fly  1124 PYQAIDPYYPFENRSVEDFTIGTENCDNHKIGYCNGPLKSGTTYRVKVRAFTGADKFTDTAYSFP 1188
            ||                                        .:|..:.||              
Zfish   895 PY----------------------------------------NWRRSLFAF-------------- 905

  Fly  1189 IQTDQDNTSLIVAITVPLTIILVLLVT---LLFYKRRRNNCRKTTKDSRANDNMSLPDSVIEQNR 1250
                             ||::...|.|   |.||   .|...||....|            :...
Zfish   906 -----------------LTLLPSCLWTDYLLAFY---INPWSKTALKKR------------KLTS 938

  Fly  1251 PILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKL 1315
            |:.:.:|..:.:.|..||.::||.:|||||.||.|.....||||.||||||:|||||||.||.||
Zfish   939 PVQLSDFEAYLKDMGKDSAYKFSLQFEELKSVGLDLSHEAADLPINRPKNRYTNILPYDFSRVKL 1003

  Fly  1316 QPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREK 1380
            ..:.:|||||||||||:||:|||||:|.|||||..||:|||:|..:.....|||||:|.|:.|.|
Zfish  1004 ISLHNDEGSDYINANYIPGYNSPREYIATQGPLPDTRNDFWKMVLQQKVHIIVMLTQCNERRRVK 1068

  Fly  1381 CDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVP--NPP 1443
            ||.|||....||.||:|.|::|.::...:|.:..|.|....|.:.:.||::|:|||.|||  |..
Zfish  1069 CDHYWPFSDEPVAYGEISVEMLAETDSPEWTIRSFRLAYADETQDVLHFNYTSWPDHGVPTVNAI 1133

  Fly  1444 QTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERV 1508
            :::::||:..|.::...:.||||||||||||:||||:|||::|.|...:|||:.|:|..||..|:
Zfish  1134 ESILQFVQIVRQQVNRSKGPIVVHCSAGVGRTGTFISLDRLMQHIQEHEYVDVLGLVSDMRSHRL 1198

  Fly  1509 WMVQTEQQYICIHQCLLAVLEGKE 1532
            .|||||:||:.||||:|.:.:.|:
Zfish  1199 SMVQTEEQYVFIHQCVLLMWKKKK 1222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 9/27 (33%)
fn3 220..304 CDD:278470 19/97 (20%)
fn3 315..391 CDD:278470 16/82 (20%)
FN3 405..494 CDD:238020 14/94 (15%)
FN3 511..574 CDD:238020 11/68 (16%)
FN3 583..671 CDD:238020 20/107 (19%)
fn3 683..753 CDD:278470 16/74 (22%)
fn3 787..850 CDD:278470 22/90 (24%)
fn3 866..935 CDD:278470 18/74 (24%)
fn3 961..1043 CDD:278470 7/81 (9%)
PTPc 1272..1525 CDD:214550 139/254 (55%)
PTPc 1298..1525 CDD:238006 123/228 (54%)
ptproNP_001077283.1 fn3 362..423 CDD:278470 10/60 (17%)
FN3 453..543 CDD:238020 19/91 (21%)
FN3 547..647 CDD:238020 25/127 (20%)
FN3 744..812 CDD:214495 17/70 (24%)
PTPc 959..1215 CDD:214550 139/255 (55%)
PTPc 986..1215 CDD:238006 123/228 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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