DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and Ptp69D

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_524048.2 Gene:Ptp69D / 39443 FlyBaseID:FBgn0014007 Length:1462 Species:Drosophila melanogaster


Alignment Length:1340 Identity:309/1340 - (23%)
Similarity:512/1340 - (38%) Gaps:364/1340 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 GRNYSLSV----QAVSKKM-----ESNETSIFVVTRPSSPIIEDLKSIRMGLN-------ISWKS 517
            |:|.||..    :||:.|:     ..|.|...:.|.|       |||...|..       |.:|:
  Fly    38 GKNVSLECASENEAVAWKLGNQTINKNHTRYKIRTEP-------LKSNDDGSENNDSQDFIKYKN 95

  Fly   518 -----DVNSKQEQYEVLYSRNGTSDLRTQKTKESRLVIKNLQPGAGYELKVFAVSHDLRSEPHAY 577
                 |||.|.       |.|.|...:|.:...:...::...|....:.....:...::.:...|
  Fly    96 VLALLDVNIKD-------SGNYTCTAQTGQNHSTEFQVRPYLPSKVLQSTPDRIKRKIKQDVMLY 153

  Fly   578 -FQAVYP-NPPRNMTIETVRSNSVLVHWSPPESGEF--TEYSIRYRTDSEQQWVRLPSVRSTEAD 638
             ...:|| |...|..::.::..|..         ||  |..||....|:...:.         .:
  Fly   154 CLIEMYPQNETTNRNLKWLKDGSQF---------EFLDTFSSISKLNDTHLNFT---------LE 200

  Fly   639 ITDMTKGE----KYTIQVNTVSFGVESPVPQEVNTTVPPNPVSNIIQLVDSRNITLEWPKPEGRV 699
            .|::.|.|    |.|:..:|   |:|. ..:|:...|...|           .:::::.|..|..
  Fly   201 FTEVYKKENGTYKCTVFDDT---GLEI-TSKEITLFVMEVP-----------QVSIDFAKAVGAN 250

  Fly   700 ESYILKWWPSDNPGRVQ----------TKNVSENKSADDLSTVRVLIGELMPGVQYKFDI----- 749
            :.| |.|..:|....:|          |...:.:|...:.|....::....|...|...|     
  Fly   251 KIY-LNWTVNDGNDPIQKFFITLQEAGTPTFTYHKDFINGSHTSYILDHFKPNTTYFLRIVGKNS 314

  Fly   750 ----QTTSYGILSGITSLY--PRTMPLIQSDVVVANGEKEDERDTITLSYTPTP----------- 797
                |.|.|.  .|||:|.  |..:|.:::....|:        |||:.:.|.|           
  Fly   315 IGNGQPTQYP--QGITTLSYDPIFIPKVETTGSTAS--------TITIGWNPPPPDLIDYIQYYE 369

  Fly   798 ------------------QSSSKFDIYRFSLGDAEIRDKEKLANDTDRKVTFTGLVPGRLYNIT- 843
                              |.:|:...|.|        ||.|.|.|.:.:|....       ::| 
  Fly   370 LIVSESGEVPKVIEEAIYQQNSRNLPYMF--------DKLKTATDYEFRVRACS-------DLTK 419

  Fly   844 ---VW------TVSGGVASLPIQRQDRLYPEPITQLHATNIT-DTEISLRWDLPKGEYNDFDIAY 898
               .|      |...|||:.|....        .|.|..|:| ...|::.||:||.. |...::|
  Fly   420 TCGPWSENVNGTTMDGVATKPTNLS--------IQCHHDNVTRGNSIAINWDVPKTP-NGKVVSY 475

  Fly   899 LTADNLLAQNMTT----------------RNEITISDLRPHRNYTFTVVVRSGTESSVLR---SS 944
            |.  :||...|:|                .::.....:.|:.|||.||       |::.|   :.
  Fly   476 LI--HLLGNPMSTVDREMWGPKIRRIDEPHHKTLYESVSPNTNYTVTV-------SAITRHKKNG 531

  Fly   945 SPLSASFTTNEAVPGRVERFHPTDVQPSEINFEWS------LPS-SEANGVIRQFSIAYTNINN- 1001
            .|.:.|.....:.|..:.|     ...|::|.:..      ||. ||.||.|..:.:....||| 
  Fly   532 EPATGSCLMPVSTPDAIGR-----TMWSKVNLDSKYVLKLYLPKISERNGPICCYRLYLVRINND 591

  Fly  1002 ---------LTDAGMQDFESEEAFGVIKNLKPGETYVFKIQA----KTAIGFGPEREYRQTMPIL 1053
                     |..|..|:..|:       |:.....|:.::.:    :..|..|.|:.:.:...|:
  Fly   592 NKELPDPEKLNIATYQEVHSD-------NVTRSSAYIAEMISSKYFRPEIFLGDEKRFSENNDII 649

  Fly  1054 ------------APP---RPATQVVPTE--VYRSSSTIQIRFRK-NYFSDQNGQVRMYTIIVAED 1100
                        ..|   :|....:|.:  :..|.|.:.|...| |.....|  :..:.:.:.|.
  Fly   650 RDNDEICRKCLEGTPFLRKPEIIHIPPQGSLSNSDSELPILSEKDNLIKGAN--LTEHALKILES 712

  Fly  1101 ---DAKNA-SGLEMPSWLDVQSYSVWLPYQAIDPYYPFENRSVEDFTIGTENCDNHKIGYC---- 1157
               |.:|| :..|.|.            ..|::|..|..:.|.:.|. |..:.:::..|:.    
  Fly   713 KLRDKRNAVTSDENPI------------LSAVNPNVPLHDSSRDVFD-GEIDINSNYTGFLEIIV 764

  Fly  1158 ---NGPLKSGTTYRVKVRAFTGADKFTDTAYSFPIQTDQDNTSLIVAI-----TVPLTIILVLLV 1214
               |..|.:.:.|         .|..|....:.|||: .:|....::|     .|.|.:|||.:|
  Fly   765 RDRNNALMAYSKY---------FDIITPATEAEPIQS-LNNMDYYLSIGVKAGAVLLGVILVFIV 819

  Fly  1215 TLLFYKRRRNNCRKTTKDSRANDNMSLPDS----------------VIEQNR------PILIKNF 1257
            ..:|:.      :||..:.:..|.::|.||                :...|.      ||...:.
  Fly   820 LWVFHH------KKTKNELQGEDTLTLRDSLSRALFGRRNHNHSHFITSGNHKGFDAGPIHRLDL 878

  Fly  1258 AEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDE 1322
            ...|:....|:|:.|..|:|.|.:...|:....:||..|..|||:.:|..||.:|.||..::..:
  Fly   879 ENAYKNRHKDTDYGFLREYEMLPNRFSDRTTKNSDLKENACKNRYPDIKAYDQTRVKLAVINGLQ 943

  Fly  1323 GSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPN 1387
            .:||||||:|.|:...::||..|||:.||.||||||.||.:...|||||...|..:.||.:|||.
  Fly   944 TTDYINANFVIGYKERKKFICAQGPMESTIDDFWRMIWEQHLEIIVMLTNLEEYNKAKCAKYWPE 1008

  Fly  1388 DTVPVF----YGDIKVQILNDSHYADWVMTEFMLCR-----GSEQ--RILRHFHFTTWPDFGVPN 1441
               .||    :|||.|:...:....|::.....:.:     |.|:  |.:..:|:.||.||..|.
  Fly  1009 ---KVFDTKQFGDILVKFAQERKTGDYIERTLNVSKNKANVGEEEDRRQITQYHYLTWKDFMAPE 1070

  Fly  1442 PPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKE 1506
            .|..:::|:|........::.||:|||||||||:||.:.||.::||:...|.|.|:..|..:|.:
  Fly  1071 HPHGIIKFIRQINSVYSLQRGPILVHCSAGVGRTGTLVALDSLIQQLEEEDSVSIYNTVCDLRHQ 1135

  Fly  1507 RVWMVQTEQQYICIHQCLL-------------AVLEGKENIVGPAREMHDNEGYEGQQVQLDENG 1558
            |.::||:.:|||.:::.||             .:....|::     :...|||....:|:.::  
  Fly  1136 RNFLVQSLKQYIFLYRALLDTGTFGNTDICIDTMASAIESL-----KRKPNEGKCKLEVEFEK-- 1193

  Fly  1559 DVVATIE--------GHLSHHDLQQAEAEAID-DENAAIL 1589
             ::||.:        |....::::....|.|. |.|..||
  Fly  1194 -LLATADEISKSCSVGENEENNMKNRSQEIIPYDRNRVIL 1232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020 9/33 (27%)
FN3 511..574 CDD:238020 11/74 (15%)
FN3 583..671 CDD:238020 19/94 (20%)
fn3 683..753 CDD:278470 14/88 (16%)
fn3 787..850 CDD:278470 18/101 (18%)
fn3 866..935 CDD:278470 22/85 (26%)
fn3 961..1043 CDD:278470 21/102 (21%)
PTPc 1272..1525 CDD:214550 98/263 (37%)
PTPc 1298..1525 CDD:238006 90/237 (38%)
Ptp69DNP_524048.2 IG_like 139..233 CDD:214653 21/115 (18%)
Ig 150..221 CDD:143165 18/91 (20%)
fn3 237..321 CDD:278470 15/95 (16%)
FN3 339..432 CDD:238020 18/115 (16%)
FN3 439..535 CDD:238020 26/113 (23%)
PTPc 892..1155 CDD:214550 99/265 (37%)
PTPc 920..1155 CDD:238006 91/237 (38%)
PHA02694 <1121..1206 CDD:177476 20/92 (22%)
PTPc 1186..1449 CDD:214550 10/50 (20%)
PTPc 1216..1449 CDD:238006 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443523
Domainoid 1 1.000 156 1.000 Domainoid score I1041
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46470
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

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