DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and Ptpmeg

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster


Alignment Length:372 Identity:113/372 - (30%)
Similarity:158/372 - (42%) Gaps:97/372 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1247 EQNRPILIK------------NFAEHYRLMSADSDFRFS--------------EEFEELKHVGRD 1285
            :::.|:|::            ....|..|:..|:.|..|              .::|.:.....|
  Fly   591 QRSAPLLLEEEPLYQYVPESDEIGSHSNLLDGDALFTQSLLLLSDGLASGALLAQYELMYRKNPD 655

  Fly  1286 QPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYV----PGHNSPREFIVTQG 1346
            ...|.|..|.|.||||:.:|.|||.:|..|  |:...| ||||||||    || .:...:|.|||
  Fly   656 LAITEARKPANAPKNRYRDISPYDCTRVSL--VNSLTG-DYINANYVNMEIPG-GAVNRYIATQG 716

  Fly  1347 PLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWP--NDTVPVFYGDIKVQILND--SHY 1407
            ||.||..|||||..:.:|..:||||...|.||:||.||||  .:.:.:..| ..|:.|::  ...
  Fly   717 PLASTTTDFWRMVQQESSHLLVMLTTVMESGRQKCHQYWPVTGEELQLAEG-FSVRCLSEKPDET 780

  Fly  1408 ADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVPNPPQTLVRF---VRAFRDR------------- 1456
            ..:|..||:|....|||.:.|..:..|||..||:.|...:.|   |||.|:|             
  Fly   781 GSFVFREFVLKDKHEQRHIHHMQYLAWPDHCVPSDPNLFLEFTERVRAARNRTLLQEIEESLKQV 845

  Fly  1457 ------------------------------------------IGAEQRPIVVHCSAGVGRSGTFI 1479
                                                      |.|...|::||||||:||:|..|
  Fly   846 RLMDADADADENGGLMRERKCAASNGATPEDETPVSTSVHQCISAANPPVIVHCSAGIGRTGVLI 910

  Fly  1480 TLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLA 1526
            .:|..|..:...:.|....||..||.:|..|||...||..:.:|:.|
  Fly   911 LMDTALALMEAREPVYPLDIVRTMRDQRACMVQNVSQYRFVCECICA 957

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 106/332 (32%)
PTPc 1298..1525 CDD:238006 99/292 (34%)
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492
Y_phosphatase 666..955 CDD:278528 99/293 (34%)
PTPc 668..955 CDD:238006 98/291 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443515
Domainoid 1 1.000 133 1.000 Domainoid score I1104
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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