DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and PTP-ER

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster


Alignment Length:1640 Identity:302/1640 - (18%)
Similarity:502/1640 - (30%) Gaps:656/1640 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 KEGEP--------PGPAQAAFKGLVPGRAYNISVQTMSEDEISLPTTAQYRTVPLRPLNVTFDRD 323
            ||..|        |.|..||.....|..|        .||..|..:|..:  .||..|..:|:  
  Fly     9 KENAPIEYPYPQTPRPTHAAPSDTTPLEA--------GEDAESNKSTPYF--TPLEYLQTSFE-- 61

  Fly   324 FITSNSFRVLWEAPKGISEFDKYQVSVATTRRQSTV-----------PRSNE-PVAFFDFRDIAE 376
             ..|.:..|....| |..|.:..:..|.|. ||.|:           |.|:: |.....|:.:::
  Fly    62 -FPSPTVEVGGGVP-GFPEHEDQEEEVFTP-RQFTITSPHPAAHVHHPSSSQSPTLGRKFKRLSQ 123

  Fly   377 -PGKTFNVIVKTVSGKVTSWPATGDVTLRPLPVRNLRSINDDKTNTMIITWEADPASTQDEYRIV 440
             ..::.:..:.|.||:                 ..:.....||.|||......|    ||....:
  Fly   124 YDRRSCSPHINTSSGE-----------------ERVSGRGIDKENTMPKGGSVD----QDLENSL 167

  Fly   441 YHELETFNGDTSTLTTDRTRFTLESLLPGRNYSLSVQAVSKKMESNETSIFVVTRPSSPIIEDLK 505
            |                                     :||...::.|.:|          :|..
  Fly   168 Y-------------------------------------LSKSEHNSPTILF----------KDES 185

  Fly   506 SIRMGLNISWKSDVNSKQEQYEVLYSRNGTSDLRTQKTKESRLVIKNLQPGAGYELKVF----AV 566
            |...||..|            .:.||....|.:.......|.|.|.|   .|||:...|    .:
  Fly   186 STTPGLEAS------------RLSYSPKLLSSINNLNVSGSPLNIIN---SAGYKNGNFFRFPEI 235

  Fly   567 SHDLRSEPHAYFQAVYPNPPRNMTIETV---------RSNSVLVHWSPPESGEFTEYSIRYRTDS 622
            .|.::..|                ::||         ||.::.   .|||..:......:.|.:.
  Fly   236 DHVVQDAP----------------MDTVCLEEATRRDRSPALA---EPPEQQQQKSEGRKNRKNK 281

  Fly   623 EQQWVRLPSVRSTEADITDMTKGEKYTIQVNTVSFGVESPVPQEVNTTVPPNPVSNIIQLVDSRN 687
            ....:|          |||:                   |:......:..|.|.:..|:....:.
  Fly   282 NNLTIR----------ITDV-------------------PIKNSSQPSPLPKPKTPTIKSTKEKA 317

  Fly   688 ITLEWPKPEGRVESYILKWWPSDNPGRVQTKNVSENK-SADDLSTVRVLIGELMPG---VQYKFD 748
            .:|:....|..:.              :...|::|:. |.||:.|     |:..|.   :.:...
  Fly   318 RSLDSAANESELS--------------IVVHNITESHGSCDDMET-----GQSQPSTSVIHHHLH 363

  Fly   749 IQTTSYGILSGITSLYPRTMPLIQSDVVVANGEKEDERDTITLSYT------------------- 794
            :|..:       ::::..::..:.|.:.:||..:...|.:..::.|                   
  Fly   364 LQQPA-------SAIHSTSLSRLDSHLSLANQRRTPRRKSPGINTTDWLMYHRKQNPYQVQPTHC 421

  Fly   795 -PTPQSSSKFDI-YRFSLGDAEIRDK------------EKLANDTDRK------VTFTGL--VPG 837
             .|.|||...|. ...||||.|::..            ..||..:..|      .:.|.|  :|.
  Fly   422 SSTTQSSLDSDASLTPSLGDFELKSACSVDGGSKFGIGASLAPRSAHKHNQLLHSSSTNLKTLPE 486

  Fly   838 RLYNITVWTVSGGVASLPIQRQDRLYPEPITQLHATNITDTEISLRWDLPKGEYNDFDI-AYLTA 901
            .|..:...:..||....|.:::....|.|..|...|..|.:...|:   .:|..:...: .:.:.
  Fly   487 CLTLVEFSSSGGGPKESPFKQKSMDLPMPTLQAKTTVSTSSMNLLQ---RRGSNHSLTLNLHSSC 548

  Fly   902 DNLLAQNMTTRNEITISDLRPHRNYTFTVVVRSGTESSVLRSSSPLSASFTTNEAVPGRVERFHP 966
            .||:...::            |.||:...::.|       :||..|.|         |...:...
  Fly   549 GNLMNSGLS------------HSNYSLGSILNS-------KSSCNLDA---------GTASQIRA 585

  Fly   967 TDVQPSEINFEWSLPSSEAN--GVIRQ----FSIAYTNINNLTDAG----MQDFESEEAFGVIKN 1021
            ..:..|.:     |.||:.:  |:.|:    .||.....:..|..|    ||..:.::|      
  Fly   586 DQLPQSHL-----LGSSQGSRQGLFRRRGSNHSITLKTGHTTTSCGDLNSMQQLQQQQA------ 639

  Fly  1022 LKPGETYVFKIQAKTAIGFG---------PER---EYRQT-------MPILAPPRPATQVVPTEV 1067
            :...|.|........:.|.|         |:|   |.|.:       |..:......|::..|::
  Fly   640 MLSAEKYNRLNMRTNSTGSGSGSGSNVPTPKRGLLERRGSNQSLTLNMGSILGGAAGTEIQMTDI 704

  Fly  1068 YRSSSTI-------QIRFRKNYFSDQN------------GQVRMYTIIVAEDDAKNASGLEMPSW 1113
            .:...|:       |...::.:||.:|            |||..          .:||.|: |: 
  Fly   705 VQPKVTVCSCAAANQAPHQRKFFSTENLNSSKANSQKFFGQVCF----------GSASDLQ-PN- 757

  Fly  1114 LDVQSYSVWLPYQAIDPYYPFENRSVEDFTIG-TENCDNHKIGYCNGPLKSGTTYRVKVRAF--- 1174
                               |.::...||..|| |..|             :||...:..|..   
  Fly   758 -------------------PQQDSVREDQAIGATCTC-------------AGTVRNIMTRPLSPQ 790

  Fly  1175 TGADKFTDTAYSFPIQTDQDNTSLIVAITVPLTIILVLLVTLLF---YKRRRNNCRK------TT 1230
            |.:::|  ..|...||       ::.:.:.||....::.:..:|   |:..||...:      ..
  Fly   791 TTSEEF--KIYLASIQ-------MLQSASNPLNQFDLIRLNYVFDHSYQTNRNIIEQPPVLGSNA 846

  Fly  1231 KDSRANDNMSLPDSVIEQNRPILIKNFAEHYRLMSADSDFRFSEEFEEL-----KHVGRDQPCTF 1290
            :|.....:|..|.|   ::..:|    |.:..::|     |.::...||     |.:.||....|
  Fly   847 RDVETPTDMVPPSS---EDSELL----ASYQTVVS-----RMAQPIPELKENEQKRIFRDLHKEF 899

  Fly  1291 ADLPCN----------RPKNRFTNILPYDHSRFKLQ-----------------PVDDDEGSDYIN 1328
            .|||.|          :.|||:..|||.::||..|:                 .|...|...|||
  Fly   900 WDLPLNHQEKPMVFGSQTKNRYKTILPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYIN 964

  Fly  1329 ANYVPGHNSPRE-FIVTQGPLHSTRDDFWRMCWESNSR--------------------------- 1365
            |||:.|.:...: ::.|||||.:|..:||.|.:::..|                           
  Fly   965 ANYIKGPDYVSKCYVATQGPLPNTIFEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQ 1029

  Fly  1366 AIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDS----HYADWVMT------------- 1413
            .|||||...|..|:||..|:|.:...:|....|.::...|    .|.|..:|             
  Fly  1030 KIVMLTNFTEANRQKCAVYFPIELNEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSD 1094

  Fly  1414 -------------------------EFMLCRGS-----EQRILR--------------------- 1427
                                     |.:..:||     ...|:|                     
  Fly  1095 AIDYEISGRHIGVESVKVTLEGDLLEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSA 1159

  Fly  1428 ----------HFHFTTWPDFGVPNPPQTLV--------------RF-----VRAFRDRIGAEQR- 1462
                      |:.:..|||...|....||:              .|     .|:.|:...|.|| 
  Fly  1160 SYHLQKIYCYHYWYPDWPDHHSPRDINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRL 1224

  Fly  1463 ------------PI-VVHCSAGVGRSGTFITLDRILQQI-------------------------N 1489
                        |: |:|||||:||:|.|..:...::|:                         |
  Fly  1225 EIYQQDIFNAVQPLPVIHCSAGIGRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHN 1289

  Fly  1490 TSD----------------------------------------YVDIFGIVYAMRKERVWMVQTE 1514
            .:|                                        :||:.|||..:|.:|..|||..
  Fly  1290 PTDSDSSFTCNTIRHISHILDHRDAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNS 1354

  Fly  1515 QQYICIHQCLLAVLE 1529
            :||..||:.:...|:
  Fly  1355 EQYELIHRAICLYLK 1369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470 12/44 (27%)
fn3 315..391 CDD:278470 18/88 (20%)
FN3 405..494 CDD:238020 13/88 (15%)
FN3 511..574 CDD:238020 14/66 (21%)
FN3 583..671 CDD:238020 13/96 (14%)
fn3 683..753 CDD:278470 11/73 (15%)
fn3 787..850 CDD:278470 18/103 (17%)
fn3 866..935 CDD:278470 11/69 (16%)
fn3 961..1043 CDD:278470 17/100 (17%)
PTPc 1272..1525 CDD:214550 101/488 (21%)
PTPc 1298..1525 CDD:238006 91/447 (20%)
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 91/447 (20%)
PTPc 917..1364 CDD:238006 91/446 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443525
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19134
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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