DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and Ptp52F

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster


Alignment Length:1763 Identity:372/1763 - (21%)
Similarity:626/1763 - (35%) Gaps:596/1763 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LAISIPNNPGLDDGASYRLDYSPPFGYPEPNTTIASREIGDEIQFSRALPGTKYNFWLYYTNFTH 109
            |..||.|.      |.|.:|           ..|.....|.|.:.:.|......|...:||:.  
  Fly    57 LGFSISNE------ADYSID-----------KVICRNGSGSETEANAAHVCENLNPCTFYTSV-- 102

  Fly   110 HDWLTWTVTITTAPDPPSNLSV----QVRSGKNAIILWSPPTQGSYTAFKIKV------------ 158
               :::...::..| |||:.::    :.:..|..:      |....||..|||            
  Fly   103 ---VSFRSNVSGKP-PPSDQTIYAYTEYKQPKTTV------TSVVATANTIKVTWQTNDRACVES 157

  Fly   159 LGLSEASSSYNRTFQ-VNDNTFQHSVKELTPGATYQVQAYTIYDGKESVAYTSRNFTTKPNTPGK 222
            .|::..::.|.::|| :||.:.|..| .|:...|:.:...|..:....|...:.:..|:...||.
  Fly   158 FGITAKATDYTKSFQLLNDKSSQTFV-NLSACLTHTITLDTRNNASVVVDTDATDVDTQYAEPGD 221

  Fly   223 FIVWFRNETTL-----LVLWQPPYPAGIYTHYKVSIEPPDANDSVLYVEKEGEPPGPAQAAFKGL 282
            .::   |.|.|     ::.|..|......::|....:   .||......::.....|:       
  Fly   222 LVM---NVTNLASGITMITWGDPSEKNCISNYVFKWQ---RNDCGTDQNQDTTTDVPS------- 273

  Fly   283 VPGRAYNISVQTMSEDEISLPTTAQYRTVPLRP--------LNVTFD---RDFITSNSFRVLWEA 336
                       |.:.:||...||....|.|..|        .:|:.|   |:::.::        
  Fly   274 -----------TETTNEIDYVTTTPMETTPDTPSDEVKCEWTDVSSDGKLREYLLTD-------- 319

  Fly   337 PKGISEFDKYQVSVATTRRQSTVPRSNEPVAFFDFRDIAEPGKTFNVIVKTVSG----KVTSWP- 396
               :...|.|...|                 |.:....|:..:||....|.||.    ..|::| 
  Fly   320 ---LQGCDLYTFQV-----------------FINENSTAKASQTFTSAEKLVSAVYEPSPTAYPT 364

  Fly   397 ----------------ATGDVTLR-PLPVRNLRSINDDKTNTMIITWEADPASTQDEY--RIVYH 442
                            |...|||. |:.....:::|.....|..|..:.||...   |  .||.:
  Fly   365 QLHWTWFSPQNHPKCVANYSVTLTGPIQRSENKTMNVITEETFAIFDDLDPCGI---YLVEIVPN 426

  Fly   443 ELETFNG----DTSTLTTDRTRFTLESLLPGRNYSLSVQAVSKKMESNETSIFVVTRPSSPIIED 503
            :|....|    :.||:..|:.....:.::....||:.|..                  .:|...|
  Fly   427 QLNGSAGTKYQEQSTVGEDQPSVIQDPVVEAEAYSMEVSW------------------KTPEYAD 473

  Fly   504 L--KSIRMGLNISWKSDVNSKQEQYEVLYSRNGTSDLRTQKTKESRLVIKNLQPGAGYELKVFAV 566
            |  ...|:.   .|..|  .|..:.|.|       .:.||.|  :.:..|||.....|.:::.  
  Fly   474 LCIDGYRLS---GWMED--DKLVEVEAL-------SITTQNT--TVVFDKNLLACQVYIIQII-- 522

  Fly   567 SHDLRSEPHAYFQAVYPNPPRNMTIETVRSNSVLVHWSPPESGEFTEYSIRYRTDSEQQWVRLPS 631
                            |....|:                  .|:..:..:               
  Fly   523 ----------------PYTKENL------------------DGQLRQVGV--------------- 538

  Fly   632 VRSTEADITDMTK--------GEKYTIQVNTVSFGVESPVPQEVNTTVPP-------NPVSNIIQ 681
              .|:|.|.|.||        |.::   ::.::|..      :.|.:.|.       |..:.:  
  Fly   539 --ETKAAIVDYTKVKLEMKNAGSEF---IDLIAFNA------DYNNSCPTIFALFTCNATTQV-- 590

  Fly   682 LVDSRNITLEWPKPEGRVESYILKWWPSDNPGRVQTKNVSENKSADDLS-----TVRVLI----G 737
                ||     |..|..||.:..:.:               |.|...||     ..:|::    |
  Fly   591 ----RN-----PYAERYVEGHSKQGF---------------NASLSPLSPYATYVCKVILYNVAG 631

  Fly   738 ELMPGVQYKFDIQTTSYGILSGITSLYPRTMPLIQSDVVVANGEKEDERDTIT---LSYTPTPQS 799
            ...|.|.  .|:.||:|         :|.     |.:.|:.      |:.|::   .::.|...:
  Fly   632 PSEPVVD--ADMHTTTY---------FPE-----QPESVML------EKSTVSSLLFNWQPPTYT 674

  Fly   800 SSKFDIYR----------FSLGDAEIRDKE-KLANDTDRKVTFTGLVPGRLY------------- 840
            :.....|:          |...|..|.::: |.....|..|.||||.|...|             
  Fly   675 NGPIKYYQAFLMRHEASYFVPADCAIVEQDTKSETKGDPSVNFTGLAPAVRYMMQVAAQNDFGMG 739

  Fly   841 -------NITVWTVSGGVASLPIQRQDRLYPEPITQLHATN--ITDTEISLRWDLP---KGEYND 893
                   .||:..||..|..|.:          :||....|  :.:..:::.|.:|   .|:...
  Fly   740 VYTEPVIGITLPAVSDSVTQLTV----------LTQGPVNNNAVYEANVTITWKVPCKSNGDIEY 794

  Fly   894 FDIAYLTADNLLAQ------------NMTTRNEITISDLRPHRNYTFTVVVRSGTESSVLRSSSP 946
            |.:|:....|..|.            |...|...|.::::|..:||..|.|::       |....
  Fly   795 FQLAFNGTRNNFAPVSFERRVELDTGNKQGRMSYTETEMQPQFDYTVEVSVKN-------RDVEQ 852

  Fly   947 LSASFTTNEAVPGRVERFHPTDVQPSEINFEWSLPSSEANGVIRQFSIAYTNINNLTDAGMQDFE 1011
            ||:|      |||                 .|..|                       ||:....
  Fly   853 LSSS------VPG-----------------SWQSP-----------------------AGLPTIP 871

  Fly  1012 SEEAFGVIKNLKPG--ETYVFKIQAKTAIGFGPEREYRQTMPILAPPRPATQVVPTEVYRSSSTI 1074
            |:|   :||.::..  ||                         ..|.:.|...:|.::..|:|  
  Fly   872 SDE---LIKQMRANVEET-------------------------SNPTKTAIVRLPADIMTSAS-- 906

  Fly  1075 QIRFRKNYFSDQNGQVRMYTIIVAEDDAKNASGLE------MPSWLDVQSY---------SVWLP 1124
                         |.::...:::::   ||.:|:.      ...|..|.||         ...|.
  Fly   907 -------------GDIKWMALMISQ---KNCAGVPHLKYDVSSDWPKVLSYQEAGADGTGDCSLE 955

  Fly  1125 YQAIDP-YYP---------FENRSVED--FTIGTENCDNHKIGYCNGPLKSGTTYRVKVRAFTGA 1177
            ||..:. ::|         .|..|.|:  ||||.:.|...:..||||||...|.|.|.||.|| |
  Fly   956 YQTTEERWHPEPVQRQRRDGEVTSDEEIVFTIGLDKCSEVQKTYCNGPLLPDTDYNVVVRLFT-A 1019

  Fly  1178 DKFTDTA-YSFPIQTDQDNTSLIVAITVPLTIILVLLVTLLFYKRR---RNNCRKTTKDSRANDN 1238
            ..::|.| .:|..:.....|.::|::...|.:..||.:|:|:.::|   :.:..:..:|...|  
  Fly  1020 SGYSDAAVLNFKTKAAIKVTLILVSVCSCLLLAFVLGLTVLWVRKRLAWKRDSGQGIEDPFGN-- 1082

  Fly  1239 MSLPDSVIEQNRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFT 1303
                         ::.||||..|..::...  :.:.||:|:..|..:...:.::|.|:  |||:.
  Fly  1083 -------------VIAKNFAIFYTEVAKPE--KLAREFKEITVVALELSYSASELGCH--KNRYA 1130

  Fly  1304 NILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIV 1368
            :|.|||.:|..|.  .|.||||||||:::.||...:|:|.||||...:..|||||..:.|.|.||
  Fly  1131 DIFPYDKNRVILD--IDAEGSDYINASFIDGHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIV 1193

  Fly  1369 MLTRCFEKGREKCDQYWPND----TVPV-------FYGDIKVQILNDSHYADWVMTEFMLCRGSE 1422
            .:|:..|....||.:|:|.:    ||.:       .|...::.:::|.:             |.:
  Fly  1194 QVTQFREGNTIKCHEYYPYNVRGLTVTIKSKEVLELYDRTELTVVHDKY-------------GLK 1245

  Fly  1423 QRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQR----PIVVHCSAGVGRSGTFITLDR 1483
            :::: |::|..|||.|||..|..|:.||:    ::.||:|    ||||||||||||:||||.||.
  Fly  1246 EKVI-HYYFKKWPDHGVPEDPMHLIMFVK----KVKAEKRPSYSPIVVHCSAGVGRTGTFIGLDL 1305

  Fly  1484 ILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLEGK------------ENIVG 1536
            |:|::.:...::||..|..:|.:|:.||||:|||..::.|...:::.|            :::..
  Fly  1306 IMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTFLYACTYELVKHKIPRAALKMDGRPKSVTV 1370

  Fly  1537 PAREMHDNEGYEGQQVQLDENGDVVATIEGHLSHHDLQQAEAEAIDDENAAILHDDQQPLTSSFT 1601
            ||........:.    .:|...:.|::            |....:||....:      .|.|.|:
  Fly  1371 PAIPSPKKVSFP----DVDVGSEYVSS------------APITDLDDGRPIV------QLPSRFS 1413

  Fly  1602 GHHTHMPP 1609
            |...:.||
  Fly  1414 GLRRNSPP 1421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 21/97 (22%)
fn3 220..304 CDD:278470 14/88 (16%)
fn3 315..391 CDD:278470 14/90 (16%)
FN3 405..494 CDD:238020 17/94 (18%)
FN3 511..574 CDD:238020 12/62 (19%)
FN3 583..671 CDD:238020 12/95 (13%)
fn3 683..753 CDD:278470 16/78 (21%)
fn3 787..850 CDD:278470 19/96 (20%)
fn3 866..935 CDD:278470 18/85 (21%)
fn3 961..1043 CDD:278470 10/83 (12%)
PTPc 1272..1525 CDD:214550 100/267 (37%)
PTPc 1298..1525 CDD:238006 94/241 (39%)
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 19/111 (17%)
PTPc 1100..1345 CDD:214550 99/266 (37%)
PTPc 1125..1348 CDD:238006 94/244 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443521
Domainoid 1 1.000 133 1.000 Domainoid score I1104
eggNOG 1 0.900 - - E2759_KOG0791
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2866
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.840

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