DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and Sdk2

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_006247755.1 Gene:Sdk2 / 360652 RGDID:1310397 Length:2175 Species:Rattus norvegicus


Alignment Length:1918 Identity:385/1918 - (20%)
Similarity:643/1918 - (33%) Gaps:618/1918 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 APD-PPSNLSVQVRSGKNAIILWSPPTQGSYTAFKIKVLGLSEASSSYNRTF-QVNDNTFQHSVK 184
            ||: |.:.||...|...|  :.|:.|..|:....:. :|.:||.::.:.... .|:.......||
  Rat   595 APEHPVATLSTMERRAIN--LTWAKPFDGNSPLMRY-ILEMSENNAPWTILLASVDPEATSVMVK 656

  Fly   185 ELTPGATYQVQAYTIYD-GKESVAY-TSR-NFTTKPNT--PGKFIVWFRNETTLLVLWQPP---Y 241
            .|.|..:||.:...:.| ||...:. |.| :...:|.|  |...|...|...::::.||||   :
  Rat   657 GLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPPTAPPQNVIASGRTNQSIMIQWQPPPESH 721

  Fly   242 PAGIYTHYKV--------------SIEPPDAN-----DSVLYVEKEGEPPGPAQAAFKGLVPGRA 287
            ..||...|.:              :|...|.|     |.:::...|              :...|
  Rat   722 QNGILKGYIIRYCLAGLPVGYQFKNITDADVNNLLLEDLIIWTNYE--------------IEVAA 772

  Fly   288 YNISVQTMSEDEISLPTTAQYRTVPLRPLNVTFDRDFITSNSFRVLWEAP-----KGISEFDKYQ 347
            ||.:...:...:::..|.....|||  |.||  ..:...|.:.|..|.||     .||::..|. 
  Rat   773 YNSAGLGVYSSKVTEWTLQGVPTVP--PGNV--HAEATNSTAIRFTWNAPSPQFINGINQGYKL- 832

  Fly   348 VSVATTRRQSTVPRSNEPVAFFDFRDIAEPG-----KTF-----NVIVKTVSGKVTSWPATGDVT 402
            ::...|:.:.....:..|    :|:|....|     |.|     :|:..|..|   ..|.:....
  Rat   833 IAWEPTQEEEVTMVTARP----NFQDSIHVGFVSGLKKFTEYFTSVLCFTTPG---DGPRSSPQL 890

  Fly   403 LR-----PLPVRNLRSINDDKTNTMIITWEADPASTQ---DEYRIVYHELETFNGDTSTLTTDRT 459
            :|     |.||.:| |.||....::.::|: :|....   ..|||.:.|   :|...:.:|....
  Rat   891 VRTHEDVPGPVGHL-SFNDILDTSLKVSWQ-EPGEKNGILTGYRISWEE---YNRTNTRVTHYLP 950

  Fly   460 RFTLESLLPG----RNYSLSVQAVSKKMESNETSIFVVTRPSSPIIEDLKSIRMGLNIS------ 514
            ..|||..:.|    ..|::.|.|::.|.:...::..:    ||.:..:|......|.||      
  Rat   951 NVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSASTI----SSGVPPELPGAPTNLGISNIGPRS 1011

  Fly   515 -----------------WKSDVN----SKQEQYEVLYSRNGTSDLRTQKTKESRLVIKNLQPGAG 558
                             |..:..    .:.|::.::|..:...|.|:.:       :.:|.|...
  Rat  1012 VTLQFRPGYDGKTSISRWVVEAQVGMIGEGEEWLLIYQLSNEPDARSME-------VPDLNPFTY 1069

  Fly   559 YELK---VFAVSHDLRSEPHAYFQAVYPNP---PRNMTIETVRSNSVLVHWSP-PE-----SGEF 611
            |..:   |..|.....|:|....|.:...|   |.|:|:.|....|:.:.|.| ||     :.|.
  Rat  1070 YSFRMRQVNIVGTSPPSQPSRKIQTLQAPPDMAPANVTLRTASETSLWLRWMPLPEMEYNGNPES 1134

  Fly   612 TEYSIRY-RTDSEQQWVRLPSVRSTEADIT--DMTKGEKYTIQVNTVSFGVESPVPQEV----NT 669
            ..|.|:| |:|...:.:........|.:.|  |:.:..:|.:||...:.....|..|.|    ..
  Rat  1135 VGYKIKYSRSDGHGKTLSHTVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQAVVGRTRE 1199

  Fly   670 TVPPNPVSNIIQL-VDSRNITLEWPK-PE----GRVESYILKWWPSDNPGRVQTKNVSENKSADD 728
            :||.:..:|:..| ..|.::.:.|.: ||    |.|..|.:::...|:..:.:...|..|.|...
  Rat  1200 SVPSSGPTNVSALATTSSSMLVRWSEIPEADRNGLVLGYKVRYKEKDSDSQARFWLVEGNSSRSA 1264

  Fly   729 ---------LSTVRVL----IGELMPG-----VQYKFDIQTTSYGILSGITSLYPR----TMPLI 771
                     |..|:||    ||:..|.     .:...|:.....||      |:|.    ::.||
  Rat  1265 QLTGLGKYVLYEVQVLAFTRIGDGSPSHPPILERTLDDVPGPPMGI------LFPEVRTTSVRLI 1323

  Fly   772 QSDVVVANGEKEDERDTITLSYTPTPQSSSKFDIYRFSLGDAEIRDKEKLANDTDRKVTFTGLVP 836
            .......||        |.|:|..|         :|.:...|.....|.|| .:.|:...|||.|
  Rat  1324 WQPPATPNG--------IILAYQIT---------HRLNATTANTATVEVLA-PSARQYMATGLKP 1370

  Fly   837 GRLY--NITVWTVSG-GVAS----LPIQRQDRLYP--EPITQLHATNITDTEISLRW-------- 884
            ..:|  .||..|..| |.|:    :..:::||..|  :|:.|  ..::....:.|.|        
  Rat  1371 ESVYLFRITAQTRKGWGEAAEALVVTTEKRDRPQPPSKPVVQ--QEDVKARSVLLSWEPGSDGLS 1433

  Fly   885 ----------DLPKGEYNDFDIAYLTADNLLAQNMTTRNEITISDLRPHRNYTFTVVVRSGTESS 939
                      :||.|.:     |..:|.  ::.|.:.   .|:..|:|..:|.|.|...:....|
  Rat  1434 PVRYYTIQTRELPSGRW-----ALHSAS--VSHNASA---FTVDRLKPFTSYKFRVKATNDIGDS 1488

  Fly   940 VLRSSSPLSASFTTNEAVPGRVERFHPT--DVQP---SEINFEWSLPSSE-ANGVIRQFSIAYT- 997
               ..|..|.|.||.:|.|...    ||  .|.|   :.:...|..||.: .||::..|.|.|. 
  Rat  1489 ---EFSEESESLTTLQAAPDEA----PTILSVTPHTTTSVLIRWQPPSEDKINGILLGFRIRYRE 1546

  Fly   998 ----------------------------NINNLTDAGMQDFESEEAFGVIKNLKPGETYVFKIQA 1034
                                        ::.|||...:..:|       :.||.....|..::..
  Rat  1547 LLYEGLRGFTLRGINNPGAKWAELTSLYSMRNLTRPSLTQYE-------LDNLTKHRRYEIRMSV 1604

  Fly  1035 KTAIGFGPEREYRQTMPILAPPRP--ATQVVPT------EVYRSSST-IQIRFRKNYFSDQNGQV 1090
            ..|:|.||          |:||:.  ..:.|||      .::.:::| :.:.:......:|||.:
  Rat  1605 YNAVGEGP----------LSPPQEVFVGEAVPTAAPQNVAIHSATATQLDVTWEPPPLDNQNGDI 1659

  Fly  1091 RMYTIIVAEDDAKNASGLEMPSWLDVQSYSVWLPYQAIDPYYPFENRSVEDFTIGTENCDNHKIG 1155
            :.|.|...|...:|.:                   :.:...:..||      ::..:|.    .|
  Rat  1660 QGYKIYFWEVQRRNLT-------------------ERVKTLFLAEN------SVKLKNL----TG 1695

  Fly  1156 YCNGPLKSGTTYRVKVRAFTGADKFTDTAYSFPI--QTDQDNTSLIVAITVPLTIILVLLVTLLF 1218
            |        |.|.|.|.||..|.   |...|.|.  ||.|      .|.:.|.::....|.|   
  Rat  1696 Y--------TAYMVSVAAFNAAG---DGPRSTPTQGQTQQ------AAPSAPGSVKFSELTT--- 1740

  Fly  1219 YKRRRNNCRKTTKDSRANDNMSLPDSVIEQNRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVG 1283
                          :..|.:...|..   .|.|:      |.|||:.                  
  Rat  1741 --------------TSVNVSWDAPQF---PNGPL------EGYRLVY------------------ 1764

  Fly  1284 RDQPCTFADLPCNRPKNRFTNILPYD---HSRFKLQPVDDDEGSDY--------------INANY 1331
              :|||        |.:..:.|:..|   :|...|:..|..||..|              |.||.
  Rat  1765 --EPCT--------PVDGVSKIVTVDVKGNSPLWLKVKDLAEGMTYRFRIKAKTFTYGPEIEANI 1819

  Fly  1332 V--PGHNSPREFIVTQGP--------------LHSTRDDFWRMCWESNSRAIVMLTRCFEKGREK 1380
            .  ||..:|       ||              :|          |.|.......:||...:.|..
  Rat  1820 TTGPGEGAP-------GPPGVPIIVRYSSAIAIH----------WSSGDPGKGPITRYVIEARPS 1867

  Fly  1381 CDQYWPNDTVPVFYGDIKVQILNDSHYAD----WVMTEFMLCRGSEQRILRHFHFTTWPDFGVPN 1441
            .:..|     .:...||..::.:.:...|    .|..:|.:...::.            .||.|:
  Rat  1868 DEGLW-----DILIKDIPKEVTSYTFSMDILKPGVSYDFRVIAVNDY------------GFGTPS 1915

  Fly  1442 PPQTLVRFVRA--FRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMR 1504
            .|...|...:|  |.:    |...:||....|:    .||.|                 :|:.: 
  Rat  1916 SPSQSVPAQKASPFYE----EWWFLVVIALVGL----IFILL-----------------LVFVL- 1954

  Fly  1505 KERVWMVQTEQQYICIHQCLLAVLEGKENIVGPAREMHDNEGYEGQQVQLDENGDVVATIEGHLS 1569
                                  ::.|:.               :....:.|..|:   |..|.|.
  Rat  1955 ----------------------IIRGQS---------------KKYSKKTDAGGN---TKSGALG 1979

  Fly  1570 HHDLQQAEAEAIDDEN--AAILHDDQQPLTSSF---TGHHTHMPPTTSMSSFGGGGGGHTNVDAP 1629
            |     .|..::|:.:  |..|::.:..:.:||   .|.:|..||..|..|              
  Rat  1980 H-----GEMLSLDESSFPALELNNRRLSVKNSFCRKNGLYTRSPPRPSPGS-------------- 2025

  Fly  1630 DRXHSVVNQSDNNNSVVIVLVDNKPSSMICKDSKGGNIDVLESQQQQQQQQQQQPNQGGHNITT- 1693
                  ::.||.:.:....|:..:.||:..|.|     ::.:||....:.:.....|..|:... 
  Rat  2026 ------LHYSDEDVTKYNDLIPAESSSLTEKPS-----EISDSQGSDSEYEVDTNTQKAHSFVNH 2079

  Fly  1694 -ISAINGYNTLQHRRKSQLITFSSSSCDIKNSLSHEYINGSNGSA--ANGPPSSGSGSGS--GPG 1753
             ||....||:.:.::|.           |..:.::.|....:|..  ...|.|:.:..||  .| 
  Rat  2080 YISDPTYYNSWRRQQKG-----------ISRAQAYSYTESDSGEPDHVTVPNSNSTQQGSLFRP- 2132

  Fly  1754 SNRASRANVRLSFAEEDVMILPQN----HSQQS 1782
              :|||...            |||    .||||
  Rat  2133 --KASRTPT------------PQNPPNPPSQQS 2151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 21/83 (25%)
fn3 220..304 CDD:278470 18/105 (17%)
fn3 315..391 CDD:278470 20/90 (22%)
FN3 405..494 CDD:238020 23/95 (24%)
FN3 511..574 CDD:238020 14/92 (15%)
FN3 583..671 CDD:238020 25/103 (24%)
fn3 683..753 CDD:278470 19/92 (21%)
fn3 787..850 CDD:278470 19/65 (29%)
fn3 866..935 CDD:278470 16/86 (19%)
fn3 961..1043 CDD:278470 22/116 (19%)
PTPc 1272..1525 CDD:214550 47/291 (16%)
PTPc 1298..1525 CDD:238006 44/265 (17%)
Sdk2XP_006247755.1 IG_like 43..112 CDD:214653
IGc2 43..101 CDD:197706
IG_like 123..206 CDD:214653
Ig 135..191 CDD:299845
IG_like 225..307 CDD:214653
IGc2 236..289 CDD:197706
I-set 311..400 CDD:254352
Ig 329..397 CDD:143165
I-set 405..495 CDD:254352
Ig 419..495 CDD:299845
Ig 505..589 CDD:299845
IG_like 505..589 CDD:214653
FN3 593..684 CDD:238020 23/91 (25%)
FN3 696..789 CDD:238020 18/106 (17%)
FN3 797..893 CDD:238020 23/107 (21%)
FN3 898..986 CDD:238020 23/92 (25%)
FN3 996..1090 CDD:238020 15/100 (15%)
FN3 1102..1197 CDD:238020 24/94 (26%)
FN3 1204..1293 CDD:238020 20/88 (23%)
FN3 1304..1397 CDD:238020 29/116 (25%)
FN3 1403..1487 CDD:238020 17/95 (18%)
FN3 1506..1619 CDD:238020 26/133 (20%)
FN3 1629..1722 CDD:238020 23/132 (17%)
FN3 1727..1808 CDD:238020 23/134 (17%)
FN3 1840..1919 CDD:238020 16/105 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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