DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and Ptprq

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_075214.2 Gene:Ptprq / 360417 RGDID:620779 Length:2302 Species:Rattus norvegicus


Alignment Length:1757 Identity:451/1757 - (25%)
Similarity:696/1757 - (39%) Gaps:458/1757 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 FLAAFTLKDVRCADLA------ISIPNNPGLDDG------ASYRLDYSPPFGYPEPNT--TIASR 81
            |:...:..|:..:||.      |||.:...|..|      .|.|...:.|...||..|  .|:|.
  Rat   712 FVKNTSTTDIIISDLKPYTLYNISIRSYTRLGHGNQSSSLLSVRTSETVPDSAPENITYKNISSG 776

  Fly    82 EIGDEIQF--SRALPGTKYNFWLYYTNFTHHDWLTWTVTITT----------------------- 121
            ||  ||.|  .|:..|....:.:|......|:..|...|..|                       
  Rat   777 EI--EISFLPPRSPNGIIQKYTIYLKRSNSHEARTINTTSLTQTIGGLKKYTHYVIEVSASTLKG 839

  Fly   122 ---------------APD-PPSNLSVQVRSGKNAIILWSPPTQGS-----YTAF-----KIKVLG 160
                           ||| ||.|.||:..||...::.|.||.:.:     ||.:     .::.:.
  Rat   840 EGIRSRPISILTEEDAPDSPPQNFSVKQLSGVTVMLSWQPPLEPNGIILYYTVYVWDKSSLRAIN 904

  Fly   161 LSEAS-----SSYNRTFQVNDNTFQHSVKELTPGATYQVQAYTIY-DG--KESVAYTSRNFTT-- 215
            .:|||     ..||..:                ||.  |.|.|.: ||  :.|:.    ||.|  
  Rat   905 ATEASLVLSDLDYNVDY----------------GAC--VTASTRFGDGNARSSII----NFRTPE 947

  Fly   216 -KPNTPGKFIVWFR-NETTLLVLWQPPY-PAGIYTHYKVSIEPPDA----NDSVLYVEKEGEPPG 273
             :|:.|...:.:.. :.:::::.|.||. |.||..:|.|..:....    |.::|.|.||.:   
  Rat   948 GEPSDPPNDVHYVNLSSSSIILFWTPPVKPNGIIQYYSVYYQNTSGTFVQNFTLLQVTKESD--- 1009

  Fly   274 PAQAAFKGLVPGRAYNISV----------------QTMSEDEISLPTTAQYRTVPLRPL-NVTFD 321
                  ...|..|.|.:::                ...|.|.|.:.|.   :.:|..|: |:||:
  Rat  1010 ------NVTVSARIYRLAIFSYYTFWLTASTSVGNGNKSSDIIHVYTD---QDIPEGPVGNLTFE 1065

  Fly   322 RDFITSNSFRVLWEAPKGISEFDKYQVSVATTRRQSTVPRSNEP--VAF---FDFRDIAE-PGKT 380
            .  |:|.:..|.||.|...:....|.:|:   ..|.:.||...|  |.:   .||.|:.: ....
  Rat  1066 S--ISSTAIHVSWEPPSQPNGLVFYYLSL---NLQQSPPRHMIPPLVTYENSIDFDDLEKYTDYI 1125

  Fly   381 FNVIVKTVSGKVTSW------PATGDVTLRPLPVRNLRSINDDKTNTMIITWEADPASTQDEYRI 439
            |.:...|..|...::      ....||...|..:...::::   :.:::::|  ||....:...:
  Rat  1126 FKITPSTEKGFSETYTTQLHIKTEEDVPDTPPIINTFKNLS---STSILLSW--DPPLKPNGAIL 1185

  Fly   440 VYHELETFNGD--TSTLTTDRTRFTLESLLPGRNYSLSVQAVSKKMESNETSIFVVTRPSSPIIE 502
            .||  .|..|.  ..|..|......||.|.|...||....|.:.|.....:.:|..|..|:|:. 
  Rat  1186 GYH--LTLQGPHANHTFVTSGNHIVLEELSPFTLYSFFAAARTMKGLGPSSILFFYTDESAPLA- 1247

  Fly   503 DLKSIRMGLNISWKSDVNSKQEQYEVLYSRNGTSDLRTQKTKESRLVIKNLQPGAGYELKVFAVS 567
                                                                             
  Rat  1248 ----------------------------------------------------------------- 1247

  Fly   568 HDLRSEPHAYFQAVYPNPPRNMTIETVRSNSVLVHWSP-PESGEFTE-YSIR---YRTD------ 621
                             ||:|:|:....|:.|.:.||| |..|...: ||.:   :.||      
  Rat  1248 -----------------PPQNLTLINYTSDFVWLTWSPSPLPGGIVKVYSFKIHEHETDTVFYKN 1295

  Fly   622 -----SEQQWVRLPSVRSTEADITDMTK---GEKYTIQVNTVSFGVESPVPQEVNTTVPPNPVSN 678
                 ::.:...|..|.:....::..||   |.:|:   |.|.|..:..||:.|..         
  Rat  1296 ISGLQTDAKLEGLEPVSTYSVSVSAFTKVGNGNQYS---NVVEFTTQESVPEAVRN--------- 1348

  Fly   679 IIQLV--DSRNITLEWPKP---EGRVESYIL-------KWWPSDNPGRVQTKNVSENKSADDLST 731
             |:.|  |.:::::.|..|   .|.:..|::       |..|.| |....||             
  Rat  1349 -IECVARDWQSVSVRWDPPRKANGIIIHYMITVGGNSTKVSPRD-PTYTFTK------------- 1398

  Fly   732 VRVLIGELMPGVQYKFDIQ-TTSYGILSG------ITSLYPRTMPLIQSDVVVANGEKEDERDTI 789
                   |:....|.|::: :||.|  .|      |::| |.|:|...::|..:|.:.    .:.
  Rat  1399 -------LLANTSYVFEVRASTSAG--EGNESRCDISTL-PETVPSAPTNVAFSNVQS----TSA 1449

  Fly   790 TLSYTPTPQSSSKFDIYRFS--LGDAEIRDKEK-------------LANDTDRKVTFTGLVPGRL 839
            ||::|........|..|:.:  |...:.|:.|.             .||.|:.  |..||...|.
  Rat  1450 TLTWTKPDTIFGYFQNYKITTQLRPQKCREWEPEECIEHQKDQYLYEANQTEE--TVHGLKKFRW 1512

  Fly   840 YNITV---WTVSGGVASLPIQRQDRLYPE--PITQLHATNITDTEISLRW--------------D 885
            |...|   ..|....||..|..|....|.  |...:|....:...|::.|              |
  Rat  1513 YRFQVAASTNVGYSNASEWISTQTLPGPPDGPPENVHVVATSPFGINISWSEPAVITGPTFYLID 1577

  Fly   886 LPKGEYNDFDIAYLTADNLLAQNMTTRNEITISDLRPHRNYTFTVVVRSGTES-SVLRSSSPLSA 949
            :...:.:||:|::|.::.   :|.||.    |::|.....|:..:....|..| :.....|....
  Rat  1578 VKSVDDDDFNISFLKSNE---ENKTTE----INNLEVFTRYSVVITAFVGNVSRAYTDGKSSAEV 1635

  Fly   950 SFTTNEAVP-----GRVERFHPTDVQPSEINFEWSLPSSEANGVIRQF-SIAY-------TNINN 1001
            ..||.|:||     ....:..|.:|...::.|   ||.|:.||.||.: ::.|       ..|:|
  Rat  1636 IITTLESVPKDPPNNMTFQKIPDEVTKFQLTF---LPPSQPNGNIRVYQALVYREDDPTAVQIHN 1697

  Fly  1002 LTDAGMQDFESEEAFGVIKNLKPGETYVFKIQAKTAIGFGPEREYRQTMPILAPPRPATQVVPT- 1065
            |:.....|   .....:::.||.|.||...:.|..:.|.||:.:.|.||.|.||.||.::.:|. 
  Rat  1698 LSIIQKTD---TSVIAMLEGLKGGHTYNISVYAINSAGAGPKVQMRITMDIKAPARPKSKPIPIR 1759

  Fly  1066 ----EVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIVAEDDAKNASGLEMPSWLDVQSYSVWLPYQ 1126
                ::..:|:||.||....|::|.:|.:|...::|||..|:...  .:..|.|..       :.
  Rat  1760 DATGKLLVTSTTITIRMPICYYNDDHGPIRNVQVLVAETGAQQDG--NVTKWYDAY-------FN 1815

  Fly  1127 AIDPYYPFE--------------NRSVEDFTIGTENC-----DNHKIGYCNGPLKSGTTYRVKVR 1172
            ...||:..|              :.:.|.:.||.:|.     :..||  ||||||....|..|.|
  Rat  1816 KARPYFTNEGFPNPPCIEGKTKFSGNEEIYVIGADNACMIPGNEEKI--CNGPLKPKKQYLFKFR 1878

  Fly  1173 AFTGADKFTDTAYSFPIQT-----DQDNTSLIVAITVPLTIILVLLVTLLFYKRRRNNCRK---- 1228
            |.....:|||:.||.||:|     .:....:|:::|:.:..|::|...:..:.|.|...::    
  Rat  1879 ATNVMGQFTDSEYSDPIKTLGEGLSERTVEIILSVTLCILSIILLGTAIFAFARIRQKQKEGGTY 1943

  Fly  1229 -----------------------TTKDSRANDNMSLPDSVIEQNRPILIKNFAEHYRLMSADSDF 1270
                                   ..||.|....:|...|:    :||..|:|.:|...:..:|:.
  Rat  1944 SPRDAEIIDTKFKLDQLITVADLELKDERLTRLLSYRKSI----KPISKKSFLQHVEELCTNSNL 2004

  Fly  1271 RFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGH 1335
            :|.|||.||....:|...|.||||.||.||||.||.||:::|.||.......|||||||:||.|:
  Rat  2005 KFQEEFSELPKFLQDLSSTDADLPWNRAKNRFPNIKPYNNNRVKLIADVSLPGSDYINASYVSGY 2069

  Fly  1336 NSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTVPV-FYGDIKV 1399
            ..|.|||.|||||..|..|||||.||:.::.:||||:||||||.:|.||||.|..|| .:|||.:
  Rat  2070 LCPNEFIATQGPLPGTVGDFWRMVWETRTKTLVMLTQCFEKGRIRCHQYWPEDNKPVTVFGDIVI 2134

  Fly  1400 QILNDSHYADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPI 1464
            ..|.:....||.:.:..:.|..:...:|..:||.||:.|||.....|:.||:..|.....:..|:
  Rat  2135 TKLMEDIQIDWTIRDLKIERHGDCMTVRQCNFTGWPEHGVPENTTPLIHFVKLVRTSRAHDTTPM 2199

  Fly  1465 VVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLE 1529
            ||||||||||:|.||.||.:.|.||..|:|||:|:|..:|.||:.|||...|||.:|||:|.:|.
  Rat  2200 VVHCSAGVGRTGVFIALDHLTQHINDHDFVDIYGLVAELRSERMCMVQNLAQYIFLHQCILDLLS 2264

  Fly  1530 GK 1531
            .|
  Rat  2265 NK 2266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 25/99 (25%)
fn3 220..304 CDD:278470 20/105 (19%)
fn3 315..391 CDD:278470 22/82 (27%)
FN3 405..494 CDD:238020 19/90 (21%)
FN3 511..574 CDD:238020 0/62 (0%)
FN3 583..671 CDD:238020 27/106 (25%)
fn3 683..753 CDD:278470 15/82 (18%)
fn3 787..850 CDD:278470 18/80 (23%)
fn3 866..935 CDD:278470 15/82 (18%)
fn3 961..1043 CDD:278470 23/89 (26%)
PTPc 1272..1525 CDD:214550 126/253 (50%)
PTPc 1298..1525 CDD:238006 112/227 (49%)
PtprqNP_075214.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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