DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and fn1b

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_009303829.1 Gene:fn1b / 334613 ZFINID:ZDB-GENE-030131-6545 Length:2500 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550
PTPc 1298..1525 CDD:238006
fn1bXP_009303829.1 FN1 57..93 CDD:238018
fn1 101..139 CDD:278468
fn1 145..183 CDD:278468
FN1 190..234 CDD:214494
fn1 235..274 CDD:278468
FN2 361..409 CDD:128373
FN2 421..469 CDD:128373
fn1 478..516 CDD:278468
fn1 529..563 CDD:278468
fn1 569..607 CDD:278468
fn3 614..688 CDD:278470
fn3 727..798 CDD:278470
fn3 812..891 CDD:278470
fn3 909..990 CDD:278470
fn3 1000..1077 CDD:278470
fn3 1097..1155 CDD:278470
fn3 1176..1259 CDD:278470
fn3 1269..1351 CDD:278470
FN3 1362..1450 CDD:238020
fn3 1455..1534 CDD:278470
fn3 1544..1625 CDD:278470
fn3 1643..1721 CDD:278470
fn3 1733..1803 CDD:278470
fn3 1831..1911 CDD:278470
fn3 1924..2004 CDD:278470
FN3 2019..2104 CDD:238020
fn3 2236..2298 CDD:278470
fn1 2325..2364 CDD:278468
FN1 2370..2412 CDD:214494
FN1 2413..2452 CDD:238018
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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