DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptpn11a

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_956140.1 Gene:ptpn11a / 333979 ZFINID:ZDB-GENE-030131-5911 Length:594 Species:Danio rerio


Alignment Length:518 Identity:138/518 - (26%)
Similarity:214/518 - (41%) Gaps:143/518 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1082 YFSDQNGQVRMYTIIVAEDDAKNASGLEMPSWLDVQSYSVWLPYQAIDP------YYPFENRSVE 1140
            |:.:.:||::          .||...:|:.           .|....||      :.....|..|
Zfish    80 YYMEHHGQLK----------EKNGDVIELK-----------YPLNCADPTSERWFHGHLSGREAE 123

  Fly  1141 ----------------------DFTIGTENCDN------------HKIGYCNGPLKSGTTYRVKV 1171
                                  ||.:.....|:            |.:..|...||    |.|  
Zfish   124 KLLTEKGKNGSFLVRESQSHPGDFVLSVRTGDDKTDTSEGKPKVTHVMIRCQHDLK----YDV-- 182

  Fly  1172 RAFTGADKF---TDTAYSFPIQTDQDNTSLIVAITVPLTIILVLLVTLLFYKRRRNNCRKTTKDS 1233
               .|.:||   ||....:......:....::.:..||.      .|.:......:..|:.:|.:
Zfish   183 ---GGGEKFDSLTDLVEHYKKNPMVETLGTVLQLKQPLN------TTRINAAEIESRVRELSKLA 238

  Fly  1234 RANDNMSLPDSVIEQNRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTF------AD 1292
            .|.|.       ::|.                      |.||||.|    :.|.|..      ..
Zfish   239 EATDK-------VKQG----------------------FWEEFETL----QQQECKLLYSRKEGQ 270

  Fly  1293 LPCNRPKNRFTNILPYDHSRFKLQPVD-DDEGSDYINANYVPGHNS--------PREFIVTQGPL 1348
            .|.|:.|||:.||||:||:|..|...| :::||||||||.:...|.        .|.:|.|||.|
Zfish   271 RPENKNKNRYKNILPFDHTRVVLTDGDVNEQGSDYINANLIMPDNEAKSNNSKLKRSYIATQGCL 335

  Fly  1349 HSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMT 1413
            .:|..|||||.::.|||.|||.|:..|:|:.||.:|||:.:....||.::|:.:.::...|:::.
Zfish   336 QNTISDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDVSALKEYGAMRVRNVKETMAHDYILR 400

  Fly  1414 EFMLCR---GSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQR------PIVVHCS 1469
            |..|.:   |:.:|.:..:||..|||.|||..|..::.|:    :.:..:|.      |||||||
Zfish   401 ELKLSKVGQGNTERTVWQYHFRAWPDHGVPGDPGGVLDFL----EEVKLKQEGITGAGPIVVHCS 461

  Fly  1470 AGVGRSGTFITLDRILQQINTSDY---VDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLE 1529
            ||:||:||||.:|.::..|.....   :|:...:..:|.:|..|||||.||..|:..:...:|
Zfish   462 AGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIE 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 104/279 (37%)
PTPc 1298..1525 CDD:238006 94/247 (38%)
ptpn11aNP_956140.1 SH2_N-SH2_SHP_like 5..103 CDD:198203 7/43 (16%)
SH2_C-SH2_SHP_like 111..219 CDD:198185 18/122 (15%)
PTPc 247..521 CDD:214550 104/303 (34%)
PTPc 277..520 CDD:238006 94/246 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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