DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp10D and Ptpn7

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_001343311.1 Gene:Ptpn7 / 320139 MGIID:2156893 Length:359 Species:Mus musculus


Alignment Length:261 Identity:95/261 - (36%)
Similarity:136/261 - (52%) Gaps:17/261 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly  1271 RFSEEFEELKHVGRDQPCTFA-----DLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINAN 1330
            :..|||.::       |..|.     |:|.:..|:|:..|||...||..|......|.|||||||
Mouse    96 QLEEEFLKI-------PSNFVNPEDLDIPGHASKDRYKTILPNPQSRVCLGRAQSQEDSDYINAN 153

  Fly  1331 YVPGHNSPRE-FIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFY 1394
            |:.|::...: :|.||||:.:|..|||.|.|:.:...|||||: ..:|:|||..|||  |....|
Mouse   154 YIRGYDGKEKVYIATQGPMPNTVADFWEMVWQEDVSLIVMLTQ-LREGKEKCVHYWP--TEEEAY 215

  Fly  1395 GDIKVQILNDSHYADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFR-DRIG 1458
            |..:::|.:...:.::.:.:..:....|.|.::|..|:.|||...|.....|:|.|.... ....
Mouse   216 GPFQIRIQDMKEHPEYTVRQLTIQHQQECRSVKHILFSAWPDHQTPESAGPLLRLVAEVETPETA 280

  Fly  1459 AEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQC 1523
            |...|||||||||:||:|.||......||:.....|||.|||..:|.:|..|:||.:||..:|..
Mouse   281 ANSGPIVVHCSAGIGRTGCFIATRIGCQQLKARGEVDILGIVCQLRLDRGGMIQTAEQYQFLHHT 345

  Fly  1524 L 1524
            |
Mouse   346 L 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 95/260 (37%)
PTPc 1298..1525 CDD:238006 88/229 (38%)
Ptpn7NP_001343311.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
Interaction with MAP kinases. /evidence=ECO:0000250 38..51
PTPc-N7 105..349 CDD:350460 92/245 (38%)
Substrate binding. /evidence=ECO:0000250 290..296 4/5 (80%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.