DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and PTPN23

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_056281.1 Gene:PTPN23 / 25930 HGNCID:14406 Length:1636 Species:Homo sapiens


Alignment Length:364 Identity:99/364 - (27%)
Similarity:156/364 - (42%) Gaps:76/364 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1267 DSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANY 1331
            |:.:|..::.:|....||    :.|...|...|||..:::|||.:|..|:...|    |||||:.
Human  1192 DTVWRELQDAQEHDARGR----SIAIARCYSLKNRHQDVMPYDSNRVVLRSGKD----DYINASC 1248

  Fly  1332 VPGHNSP--REFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDT-VPVF 1393
            |.| .||  ...:.||.||..|..|||.|..|.....||||....|..::|..:|:|.:. .|:.
Human  1249 VEG-LSPYCPPLVATQAPLPGTAADFWLMVHEQKVSVIVMLVSEAEMEKQKVARYFPTERGQPMV 1312

  Fly  1394 YGDIKVQILN----DSHYADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFR 1454
            :|.:.:.:.:    ::|....:..:|.  ..|.:|.|.|.||.|||:.|:|:.|..|:||::...
Human  1313 HGALSLALSSVRSTETHVERVLSLQFR--DQSLKRSLVHLHFPTWPELGLPDSPSNLLRFIQEVH 1375

  Fly  1455 DRIGAEQR----PIVVHCSAGVGRSGTFITLDRILQQINTSDYV-DIFGIVYAMRKERVWMVQTE 1514
            ... ..||    ||:||||:||||:|.|..|...:|::...:.: ::..:|..||::|..|:|  
Human  1376 AHY-LHQRPLHTPIIVHCSSGVGRTGAFALLYAAVQEVEAGNGIPELPQLVRRMRQQRKHMLQ-- 1437

  Fly  1515 QQYICIHQCLLAVLEGKENIVGPAREMHDNEGYEGQQVQLDENGDVVATIEGHLSHHDLQQAEAE 1579
                                    .::|....||.          ||..:|..|..|.:.     
Human  1438 ------------------------EKLHLRFCYEA----------VVRHVEQVLQRHGVP----- 1463

  Fly  1580 AIDDENAAILHDDQQPLTSSFTGHHTHMPPTTSMSSFGG 1618
                       ...:||.|:......|:|..:.....||
Human  1464 -----------PPCKPLASASISQKNHLPQDSQDLVLGG 1491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 82/264 (31%)
PTPc 1298..1525 CDD:238006 77/238 (32%)
PTPN23NP_056281.1 BRO1_HD-PTP_like 2..357 CDD:185762
TPR 1 250..283
V_HD-PTP_like 362..700 CDD:185747
TPR 2 374..407
ALIX_LYPXL_bnd 417..701 CDD:290660
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 701..812
His 770..1130
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 888..1151
6 X 2 AA approximate tandem repeats of P-Q 953..964
Y_phosphatase 1220..1450 CDD:278528 80/273 (29%)
PTPc 1220..1449 CDD:238006 80/272 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1513..1636
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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