DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and Ptprs

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_038938979.1 Gene:Ptprs / 25529 RGDID:3452 Length:1926 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550
PTPc 1298..1525 CDD:238006
PtprsXP_038938979.1 I-set 33..124 CDD:400151
Ig strand A 33..36 CDD:409353
Ig strand A' 42..45 CDD:409353
Ig strand B 50..57 CDD:409353
Ig strand C 63..68 CDD:409353
Ig strand C' 71..73 CDD:409353
Ig strand D 80..84 CDD:409353
Ig strand E 86..93 CDD:409353
Ig strand F 103..111 CDD:409353
Ig strand G 114..124 CDD:409353
IgI_2_RPTP_IIa_LAR_like 137..232 CDD:409400
Ig strand B 152..156 CDD:409400
Ig strand C 165..169 CDD:409400
Ig strand E 196..200 CDD:409400
Ig strand F 210..215 CDD:409400
Ig strand G 222..225 CDD:409400
IgI_3_RPTP_IIa_LAR_like 245..326 CDD:409401
Ig strand B 259..263 CDD:409401
Ig strand C 272..276 CDD:409401
Ig strand E 293..297 CDD:409401
Ig strand F 305..310 CDD:409401
Ig strand G 318..321 CDD:409401
FN3 329..418 CDD:238020
FN3 425..517 CDD:238020
FN3 522..610 CDD:238020
FN3 618..712 CDD:238020
FN3 720..825 CDD:238020
FN3 833..909 CDD:214495
FN3 935..1023 CDD:238020
FN3 1028..1111 CDD:238020
PTP_tm <1217..1301 CDD:408631
R-PTPc-S-1 1348..1629 CDD:350473
R-PTP-S-2 1631..1920 CDD:350475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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