DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and Ptprc

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_612516.2 Gene:Ptprc / 24699 RGDID:3451 Length:1273 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550
PTPc 1298..1525 CDD:238006
PtprcNP_612516.2 PTP_N 5..27 CDD:289238
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 45..192
CD45 203..257 CDD:289344
FN3 366..431 CDD:238020
FN3 454..534 CDD:238020
PTPc 621..880 CDD:214550
PTPc 649..880 CDD:238006
Substrate binding. /evidence=ECO:0000250 822..828
PTPc 913..1194 CDD:214550
PTPc 939..1194 CDD:238006
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 960..984
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1219..1273
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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