DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and Ptprq

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_001357916.1 Gene:Ptprq / 237523 MGIID:1096349 Length:2301 Species:Mus musculus


Alignment Length:1731 Identity:448/1731 - (25%)
Similarity:697/1731 - (40%) Gaps:421/1731 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TLKDVRCADL-AISIPNNPGLDDG------ASYRLDYSPPFGYPEPNT--TIASREIGDEIQF-- 89
            ||.|::...| .|||.:...|..|      .|.|...:.|...||..|  .|:|.||  ||.|  
Mouse   721 TLSDLKPYTLYNISIQSYTRLGHGNQSSSLLSVRTSETVPDSAPENITYKNISSEEI--EIFFLP 783

  Fly    90 SRALPG--TKYNFWLYYTN---------------------FTHH------------DWLTWTVTI 119
            .|:..|  .||..:|..:|                     :||:            ...:..::|
Mouse   784 PRSPNGIIQKYTIYLKRSNSHEARTIETTSLTLTIGGLKKYTHYVIEVSASTLKGEGVRSMPISI 848

  Fly   120 TT---APD-PPSNLSVQVRSGKNAIILWSPPTQGS-----YTAF-----KIKVLGLSEASSSYNR 170
            .|   ||| ||.|.||:..||...::.|.||.:.:     ||.:     .:|.:..:|.|     
Mouse   849 LTEEDAPDSPPQNFSVKQLSGVTVMLSWQPPLEPNGIILYYTVYVWDKVSLKTINATEVS----- 908

  Fly   171 TFQVNDNTFQHSVKELTPGATYQ--VQAYTIY-DGK--ESVAYTSRNFTT---KPNTPGKFIVWF 227
             .:::|..:.         |.|.  |.|.|.: |||  .||.    ||.|   :|:.|.|.:.:.
Mouse   909 -LELSDLDYH---------ADYSAYVTASTRFGDGKTRSSVI----NFRTPEGEPSDPPKDVHYV 959

  Fly   228 R-NETTLLVLWQPPY-PAGIYTHYKVSIEPPDA----NDSVLYVEKEGEPPGPAQAAFKGLVPGR 286
            . :.:::::.|.||. |.||..:|.|..:...:    |.::|.|.:|   ||..      .|..|
Mouse   960 NLSSSSIILFWTPPVKPNGIIQYYSVYYQNTSSTFVQNFTLLEVTQE---PGNV------TVSAR 1015

  Fly   287 AYNISV----------QTM------SEDEISLPTTAQYRTVPLRPL-NVTFDRDFITSNSFRVLW 334
            .|.::|          .|:      |.|.|.:.|.   :.:|...: |:|::.  ::|.:..|.|
Mouse  1016 IYKLAVFSYYTFWLTASTLVGNGNKSSDVIHVYTD---QDIPEGGVGNLTYES--LSSTAINVSW 1075

  Fly   335 EAPKGISEFDKYQVSVATTRRQSTVPRSNEP-------VAFFD----FRDIAEPGKTFNVIVKTV 388
            ..|...:....|.||:   ..|.:.||...|       ..:||    :.|.     .|.:...|.
Mouse  1076 TPPSQPNGLVFYYVSL---NLQQSPPRHRRPPLTTYENSIYFDNLEKYTDY-----IFKITPSTE 1132

  Fly   389 SGKVTSWPA------TGDVTLRPLPVRNLRSINDDKTNTMIITWEADPASTQDEYRIVYHELETF 447
            .|...::.|      ..||...|..:...::::   :.:::::|  ||....:...:.||  .|.
Mouse  1133 KGFSETYTAQLHIKTEEDVPDTPPIINTFKNLS---STSILLSW--DPPLKPNGAILSYH--LTL 1190

  Fly   448 NGD--TSTLTTDRTRFTLESLLPGRNYSLSVQAVSKKMESNETSIFVVTRPSSPII--EDLKSIR 508
            .|.  ..|..|......||.|.|...||....|.:.|.....:.:|..|..|:|:.  ::|..|.
Mouse  1191 QGTHANRTFVTSGNHIVLEELSPFTLYSFLAAARTMKGLGPSSILFFYTDESAPLAPPQNLTLIN 1255

  Fly   509 MGLNISWKS--------------DVNSKQEQYEVLYSRNGTSDLRTQKTKESRLVIKNLQPGAGY 559
            ...:..|.:              .....:.:.:.::.:| .|..:|    :::|.  .|:|.:.|
Mouse  1256 YTSDFVWLTWSPSPLPGGIVKVYSFKIHEHETDTVFYKN-ISGFQT----DAKLA--GLEPVSTY 1313

  Fly   560 ELKVFAVS-----HDLRSEPHAYFQAVYPNPPRNMTIETVRSNSVLVHWSPPE--SGEFTEYSIR 617
            .:.|.|.:     :...:......|...|:..:|:........||.|.|.||.  :|....|.|.
Mouse  1314 SISVSAFTKVGNGNQFSNVVKFTTQESVPDAVQNIACVARDWQSVSVMWDPPRKANGIIIHYMIT 1378

  Fly   618 YRTDSEQQWVRLPSVRSTEADITDMTKGEKYTIQVN-TVSFGVESPVPQEVNT---TVPPNPVSN 678
            ...:|.:     .|.|......|.:.....|..:|. :.|.|..:.....|:|   |||..|.:.
Mouse  1379 VEGNSTK-----VSPRDPMYTFTKLLANTSYIFEVRASTSAGEGNESQCNVSTLPETVPSVPTNT 1438

  Fly   679 IIQLVDSRNITLEWPKPE---GRVESYIL----------KWWPSDNPGRVQTKNVSENKSADDLS 730
            ....|.|.::||.|.||:   |..::|.:          :|.|.:         ..|::.     
Mouse  1439 AFSNVQSTSVTLRWIKPDTILGYFQNYKITTQLRAQKCREWEPEE---------CVEHQE----- 1489

  Fly   731 TVRVLIGELMPGVQYKFDIQTTSYGILSGITSLYPRTMPLIQSDVVVANGEKEDERDTITLSYTP 795
                        |||.::...|                              ||           
Mouse  1490 ------------VQYLYEANQT------------------------------ED----------- 1501

  Fly   796 TPQSSSKFDIYRFSLGDAEIRDKEKLANDTDRKVTFTGLVPGRLYNITVWTVSGGVASLPIQRQD 860
            |.:...||..|||.:. |........|:......|..|...|...|:.|      ||:.|.    
Mouse  1502 TVRGLKKFQWYRFQVA-ASTNAGYGNASSWISTQTLPGPPDGPPENVRV------VATSPF---- 1555

  Fly   861 RLYPEPITQLHATNITDTEISLRWDLP-------------KGEYND-FDIAYLTADNLLAQNMTT 911
                              .|::.|:.|             |...|| |:|:::.::.   :|.||
Mouse  1556 ------------------GINISWNEPAIITGPTFYLIDVKSVDNDNFNISFVKSNE---ENKTT 1599

  Fly   912 RNEITISDLRPHRNYTFTVVVRSGTESSVLR-SSSPLSASFTTNEAVP-----GRVERFHPTDVQ 970
            .    |:||.....|:..:....|..|.... ..|......||.|:||     ....:..|.:|.
Mouse  1600 E----INDLEVFTRYSVVITAFVGNVSGAYTDGKSSAEVIITTLESVPKDPPNNMTFQKIPDEVT 1660

  Fly   971 PSEINFEWSLPSSEANGVIRQF-SIAY-------TNINNLTDAGMQDFESEEAFGVIKNLKPGET 1027
            ..:::|   ||.|:.||.|:.: ::.|       ..|:||:.....|   .....:::.||.|.|
Mouse  1661 KFQLSF---LPPSQPNGNIQVYQALVYREDDPTAVQIHNLSIIQKTD---TSVIAMLEGLKGGHT 1719

  Fly  1028 YVFKIQAKTAIGFGPEREYRQTMPILAPPRPATQVVPT-----EVYRSSSTIQIRFRKNYFSDQN 1087
            |...:.|..:.|.||:.:.|.||.|.||.||.|:.:|.     ::..:|:||.||....|::|.:
Mouse  1720 YNISVYAINSAGAGPKVQMRITMDIKAPARPKTKPIPIHDATGKLLVTSTTITIRMPICYYNDDH 1784

  Fly  1088 GQVRMYTIIVAEDDAKNASGLEMPSWLDVQSYSVWLPYQAIDPYYPFE--------------NRS 1138
            |.:|...::|||..|:...  .:..|.|..       :....||:..|              :.:
Mouse  1785 GPIRNVQVLVAEAGAQQDG--NVTKWYDAY-------FNKARPYFTNEGFPNPPCIEGKTKFSGN 1840

  Fly  1139 VEDFTIGTENC-----DNHKIGYCNGPLKSGTTYRVKVRAFTGADKFTDTAYSFPIQT-----DQ 1193
            .|.:.||.:|.     :..||  ||||||....|..|.||.....:|||:.||.||:|     .:
Mouse  1841 EEIYVIGADNACMIPGNEEKI--CNGPLKPKKQYLFKFRATNVMGQFTDSEYSDPIKTLGEGLSE 1903

  Fly  1194 DNTSLIVAITVPLTIILVLLVTLLFYKRRRNNCRK---------------------------TTK 1231
            ....:|:::|:.:..|::|...:..:.|.|...::                           ..|
Mouse  1904 RTVEIILSVTLCILSIILLGTAIFAFARIRQKQKEGGTYSPRDAEIIDTKFKLDQLITVADLELK 1968

  Fly  1232 DSRANDNMSLPDSVIEQNRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCN 1296
            |.|....:|...|:    :|:..|:|.:|...:..:::.:|.|||.||....:|...|.||||.|
Mouse  1969 DERLTRLLSYRKSI----KPVSKKSFLQHVEELCTNNNLKFQEEFSELPKFLQDLSSTDADLPWN 2029

  Fly  1297 RPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWE 1361
            |.||||.||.||:::|.||.......|||||||:||.|:..|.|||.|||||..|..|||||.||
Mouse  2030 RAKNRFPNIKPYNNNRVKLIADVSIPGSDYINASYVSGYLCPNEFIATQGPLPGTVGDFWRMVWE 2094

  Fly  1362 SNSRAIVMLTRCFEKGREKCDQYWPNDTVPV-FYGDIKVQILNDSHYADWVMTEFMLCRGSEQRI 1425
            :.::.:||||:||||||.:|.||||.|..|| .:|||.:..|.:....||.:.:..:.|..:...
Mouse  2095 TRAKTLVMLTQCFEKGRIRCHQYWPEDNKPVTVFGDILITKLMEDIQIDWTIRDLKIERHGDCMT 2159

  Fly  1426 LRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQINT 1490
            :|..:||.||:.|||.....|:.||:..|.....:..|:||||||||||:|.||.||.:.|.|:.
Mouse  2160 VRQCNFTGWPEHGVPENTTPLIHFVKLVRTSRAHDATPMVVHCSAGVGRTGVFIALDHLTQHIHD 2224

  Fly  1491 SDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLEGK 1531
            .|:|||:|:|..:|.||:.|||...|||.:|||:|.:|..|
Mouse  2225 HDFVDIYGLVAELRSERMCMVQNLAQYIFLHQCILDLLSNK 2265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 25/96 (26%)
fn3 220..304 CDD:278470 24/105 (23%)
fn3 315..391 CDD:278470 18/87 (21%)
FN3 405..494 CDD:238020 19/90 (21%)
FN3 511..574 CDD:238020 10/81 (12%)
FN3 583..671 CDD:238020 21/93 (23%)
fn3 683..753 CDD:278470 15/82 (18%)
fn3 787..850 CDD:278470 13/62 (21%)
fn3 866..935 CDD:278470 15/82 (18%)
fn3 961..1043 CDD:278470 22/89 (25%)
PTPc 1272..1525 CDD:214550 125/253 (49%)
PTPc 1298..1525 CDD:238006 111/227 (49%)
PtprqNP_001357916.1 FN3 57..151 CDD:238020
FN3 308..393 CDD:238020
fn3 399..>441 CDD:365830
FN3 570..654 CDD:238020
fn3 668..744 CDD:365830 8/22 (36%)
FN3 762..850 CDD:238020 19/89 (21%)
fn3 857..934 CDD:365830 22/91 (24%)
FN3 951..1049 CDD:238020 24/106 (23%)
FN3 1056..1137 CDD:238020 19/90 (21%)
FN3 1152..1233 CDD:238020 18/87 (21%)
FN3 1247..1337 CDD:238020 12/96 (13%)
FN3 1342..1421 CDD:238020 19/83 (23%)
FN3 1432..1535 CDD:238020 28/170 (16%)
FN3 1542..1638 CDD:238020 24/130 (18%)
FN3 1645..1734 CDD:238020 21/94 (22%)
UP_III_II 1759..1928 CDD:297589 46/179 (26%)
R-PTPc-Q 2033..2256 CDD:350464 107/222 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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