DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp10D and Ptpro

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_036021846.1 Gene:Ptpro / 19277 MGIID:1097152 Length:1261 Species:Mus musculus


Alignment Length:1660 Identity:401/1660 - (24%)
Similarity:593/1660 - (35%) Gaps:601/1660 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LAFLAAFTLKDVR--CADLAISIPNNPGLDDGASYRLDYSPP----------FGYPEPNTTIASR 81
            |..|..|.|....  ||.....:...|...:||::.:..|.|          ....:.|..:.|.
Mouse    15 LPLLGLFVLLKTSKVCAIGTAEMELTPSFSEGATHMIGASRPNVGSIVTTFHVAVQDDNNIVVSL 79

  Fly    82 EIGDEIQ----FSRALPGTKYNFWLYYTNFTHHDWLTWTVTITTAPDPPSNLSVQVRSGKNAIIL 142
            |..|.:.    :...:.|...|::..:..|.           :|.|.|               ::
Mouse    80 EASDIVSPASVYVVRVAGESKNYFFEFEEFN-----------STLPPP---------------VV 118

  Fly   143 WSPPTQGSYTAFKIKVLGLSEASSSYNRTFQVNDNTF---QHSVKELTPGATYQVQAYTIYDGKE 204
            :.....|.|....:.|               ||.|..   ..|:..||  ....|.:.:|||.|.
Mouse   119 FKATYHGLYYIITLVV---------------VNGNVVTKPSRSITVLT--KPLPVTSVSIYDYKP 166

  Fly   205 SVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPPYPAGIYTHYKVSIEPPDAND--SVLYVEK 267
            |           |.|.              ||::..||.......:|:|...:..|  ::||.: 
Mouse   167 S-----------PETG--------------VLFEIHYPEKYNVFSRVNISYWEGRDFRTMLYKD- 205

  Fly   268 EGEPPGPAQAAFKG------LVPGRAY-NISVQTMSEDEISLPTTAQY----------RTVPLRP 315
                      .|||      .:||..| ||:.|.:||...:..|..:|          ||.|..|
Mouse   206 ----------FFKGKTVFNHWLPGLCYSNITFQLVSEATFNKSTLVEYSGVSHEPKQHRTAPYPP 260

  Fly   316 LNVTFDRDFITSNSFRVLWEAPKGISEFDKY----QVSVATTRR---------------QSTVPR 361
            .|::.  .|:..|...  ||.|.|....|.:    |.|:...||               .|..|.
Mouse   261 RNISV--RFVNLNKNN--WEEPSGSFPEDSFIKPPQDSIGRDRRFHFPEETPETPPSNVSSGSPP 321

  Fly   362 SNEPVAF-----FDFRDIAEP--GKTFNVIVKTVSGKVTSWPA------TGDVTLRP-------L 406
            ||...|:     .|:...::|  ..:.:...:.....|::.||      |.|.|.:|       .
Mouse   322 SNVSSAWPDPNSTDYESTSQPFWWDSASAAPENEEDFVSALPADYDTETTLDRTEKPTADPFSAF 386

  Fly   407 PVRNLRSINDDKTNTMIITW-EADPASTQDEYRIVYHELETFNGDTSTLTTDRT--RFTLESLLP 468
            ||:            |.::| ...|.:..|.:.|:....|.|   |..||.|..  .|..|...|
Mouse   387 PVQ------------MTLSWLPPKPPTAFDGFNILIEREENF---TDYLTVDEEAHEFVAELKEP 436

  Fly   469 GRNYSLSVQAVS-------KKMESNETSIFVVTRPSSPIIEDL--KSIRMGLNI--------SWK 516
            |: |.|||...|       :|.:|.::..|.:: |:...||:|  |...:.:::        || 
Mouse   437 GK-YKLSVTTFSSSGACETRKSQSAKSLSFYIS-PTGEWIEELTEKPQHVSVHVLSSTTALMSW- 498

  Fly   517 SDVNSKQEQYEVLYSRNGT----SDLRTQKTKES-RL-------------VIKNLQPGAGYELKV 563
               .|.||.|      |.|    ..|..||.||| ||             ||:||.|||.|::.:
Mouse   499 ---TSSQENY------NSTIVSVVSLTCQKQKESQRLEKQYCTQVNSSKPVIENLVPGAQYQVVM 554

  Fly   564 FAVSHDL---RSEPHAYFQAVYPNPPRNMTIETVRSNSVLVHWSPPESGEFTEYSIRY----RTD 621
            :.....|   .|:|..:  |:.|...:::.:..:...:|::.|:.|..|.|.:|.:..    .|.
Mouse   555 YLRKGPLIGPPSDPVTF--AIVPTGIKDLMLYPLGPTAVVLSWTRPILGVFRKYVVEMFYFNPTT 617

  Fly   622 SEQQWVRLPSVRST-----EADITDMTKGEKYTIQVNTVSFG--------------VESPVPQEV 667
            ...:|.....:.:|     ...|..:.....|..:|..|::|              :.:||..|:
Mouse   618 MTSEWTTYYEIAATVSLTASVRIASLLPAWYYNFRVTMVTWGDPELSCCDSSTISFITAPVAPEI 682

  Fly   668 NTTVPPNPVSNIIQLVDSRNITLEWPKPEGRVESYILKWWPSDNPGRVQTKNVSENKSADDLSTV 732
            .:             |:..|..|           || .|...|              :..|||..
Mouse   683 TS-------------VEYFNSLL-----------YI-SWTYGD--------------ATTDLSHS 708

  Fly   733 RVLIGELMPGVQYKFDIQTTSYGILSGITSLYPRTMPLIQSDVVVANGEKEDERDTITLSYTPTP 797
            |:|                                     ..:|||.|.|               
Mouse   709 RML-------------------------------------HWMVVAEGRK--------------- 721

  Fly   798 QSSSKFDIYRFSLGDAEIRDKEKLANDTDRKV--TFTGLVPGRLYN--ITVWTVSGGVASLPIQR 858
                                  |:.....|.|  ....|.||.:||  :|..|..|...|||  |
Mouse   722 ----------------------KIKKSVTRNVMTAILSLPPGDIYNLSVTACTERGSNTSLP--R 762

  Fly   859 QDRLYPEPITQLHATNITDTEISLRWDLPKGEYNDFDIAYLTADNLLAQNM-------------T 910
            ..:|.|.|...|.|.|.|.|.::|.| :.:|..:.|::        ..|.:             .
Mouse   763 LVKLEPAPPKSLFAVNKTQTSVTLLW-VEEGVADFFEV--------FCQQLGSGHNGKLQEPVAV 818

  Fly   911 TRNEITISDLRPHRNYTFTVVVRSGTESSVLRSSSPLSASFTTNEAVPGRVERFHPTDVQPSEIN 975
            :.:.:|||.|.|...|..:|.           |.|..:.|..|..||...|     |:|.|:.: 
Mouse   819 SSHVVTISSLLPATAYNCSVT-----------SFSHDTPSVPTFIAVSTMV-----TEVNPNVV- 866

  Fly   976 FEWSLPSSEANGVIRQFSIAYTNINNLTDAGMQDFESEEAFGVI---KNLKPGETYVFKIQAKTA 1037
                        ||...:|..|.:..|....:          ||   |:|:...    :..|.|.
Mouse   867 ------------VISVLAILSTLLIGLLLVTL----------VILRKKHLQMAR----ECGAGTF 905

  Fly  1038 IGFGP-EREYRQTMPILAPPRPATQVVPTEVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIVAEDD 1101
            :.|.. |||                          ..:...:|::.|:       :.|:      
Mouse   906 VNFASLERE--------------------------GKLPYSWRRSVFA-------LLTL------ 931

  Fly  1102 AKNASGLEMPSWLDVQSYSVWLPYQAIDPYYPFENRSVEDFTIGTENCDNHKIGYCNGPLKSGTT 1166
                    :||.|       |..|     ...|                     |.|...|:|  
Mouse   932 --------LPSCL-------WTDY-----LLAF---------------------YINPWSKNG-- 953

  Fly  1167 YRVKVRAFTGADKFTDTAYSFPIQTDQDNTSLIVAITVPLTIILVLLVTLLFYKRRRNNCRKTTK 1231
              :|.|..|.           |:|.|                                       
Mouse   954 --LKKRKLTN-----------PVQLD--------------------------------------- 966

  Fly  1232 DSRANDNMSLPDSVIEQNRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCN 1296
                                    :|..:.:.|:.|||::||.:|||||.:|.|.|...||||.|
Mouse   967 ------------------------DFDSYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLN 1007

  Fly  1297 RPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWE 1361
            |.|||:|||||||.||.:|..::::||:|||||||:||:|||:|:|.|||||..||:|||:|..:
Mouse  1008 RCKNRYTNILPYDFSRVRLVSMNEEEGADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQ 1072

  Fly  1362 SNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEFMLCRGSEQRIL 1426
            ..|..|||||:|.||.|.|||.|||....|:.||||.|:::::....||....|.:....|.:.:
Mouse  1073 QKSHIIVMLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMVSEEEEEDWASRHFRINYADEAQDV 1137

  Fly  1427 RHFHFTTWPDFGVP--NPPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQIN 1489
            .||::|.|||.|||  |..:::::||...|.:....:.|:::||||||||:||||.|||:||.|.
Mouse  1138 MHFNYTAWPDHGVPPANAAESILQFVFTVRQQAAKSKGPMIIHCSAGVGRTGTFIALDRLLQHIR 1202

  Fly  1490 TSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCL 1524
            ..::|||.|:|..||..|:.|||||:|||.||||:
Mouse  1203 DHEFVDILGLVSEMRSYRMSMVQTEEQYIFIHQCV 1237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 15/83 (18%)
fn3 220..304 CDD:278470 20/92 (22%)
fn3 315..391 CDD:278470 20/101 (20%)
FN3 405..494 CDD:238020 26/105 (25%)
FN3 511..574 CDD:238020 26/91 (29%)
FN3 583..671 CDD:238020 18/110 (16%)
fn3 683..753 CDD:278470 12/69 (17%)
fn3 787..850 CDD:278470 10/66 (15%)
fn3 866..935 CDD:278470 18/81 (22%)
fn3 961..1043 CDD:278470 16/85 (19%)
PTPc 1272..1525 CDD:214550 134/255 (53%)
PTPc 1298..1525 CDD:238006 118/229 (52%)
PtproXP_036021846.1 FN3 479..571 CDD:238020 28/101 (28%)
FN3 575..675 CDD:238020 15/99 (15%)
fn3 770..850 CDD:394996 21/99 (21%)
R-PTPc-O 996..1240 CDD:350462 126/242 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836262
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0791
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3031
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.740

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