DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and F57H12.5

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_501331.1 Gene:F57H12.5 / 177592 WormBaseID:WBGene00019020 Length:543 Species:Caenorhabditis elegans


Alignment Length:364 Identity:74/364 - (20%)
Similarity:131/364 - (35%) Gaps:94/364 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1220 KRRRNNCRKTT------------------KDSRANDNM--SLPDSVIEQNRPILIKNFAEHYRLM 1264
            |..|.:||:.:                  |.|:....|  .:|.::...|:...|:...|.:..:
 Worm   164 KEVRKDCRENSVYFMERSDEKGVKKKHSKKHSKQKTKMWLGMPSALNFCNKNNDIQKIREEFGFL 228

  Fly  1265 SADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKL-QPVDDDEGSDYIN 1328
            .:....:.:|.||                 .|:.:||......||.:|.:| :|..:|  .:|||
 Worm   229 DSLVCNKTTEAFE-----------------ANKVRNREGCPKIYDENRVQLNRPGHED--VNYIN 274

  Fly  1329 ANY------------VPGH-----------NSPREFIVTQGPL---HSTRDDFWRMCWESNSRAI 1367
            |:.            ||.:           ....:.||.|.|.   .|..:|||.|.::.....:
 Worm   275 ASVITLTDVCRRMACVPAYVHLVVLYFVIFQFEHKLIVAQLPQMENESFVEDFWYMIYQEQIHLV 339

  Fly  1368 VML----------TRCF--EKGREKCDQYWPNDTVPVFYGDIKVQILND-SHYADWVMTEFMLCR 1419
            .::          |..|  |.|..   ||    |..:|..:.:..:..| ..|...|:.|    .
 Worm   340 YLMVPDDKLKNTTTSLFNDENGGY---QY----TGKMFINNRRADVSGDPKEYTIEVLPE----G 393

  Fly  1420 GSEQRILRHFHFTTWPDFGVPNPPQTL--VRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLD 1482
            .|:..|.:..|...|..  :..||:||  ::.:..|......:...:.|....|.||:.:||...
 Worm   394 NSDSVICQVHHHAPWKH--LQQPPKTLPIIKMIHQFLSEKQVQNAGVCVVSLFGCGRACSFIGAL 456

  Fly  1483 RILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIH 1521
            ..:.|:|.....:|..|:..::::|...|::..||..|:
 Worm   457 YAINQLNNGIEPNICEIMKNIKQQRPGGVESFAQYASIY 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 63/292 (22%)
PTPc 1298..1525 CDD:238006 59/266 (22%)
F57H12.5NP_501331.1 PTPc 220..500 CDD:214550 64/308 (21%)
PTPc 255..498 CDD:304379 57/256 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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