DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and C17H12.3

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_001379692.1 Gene:C17H12.3 / 177443 WormBaseID:WBGene00015929 Length:374 Species:Caenorhabditis elegans


Alignment Length:295 Identity:89/295 - (30%)
Similarity:134/295 - (45%) Gaps:67/295 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1296 NRPKNRFTNILPYDHSRFKLQPVDDDE---------GSDYINANYVPGHNSP-REFIVTQGPLHS 1350
            |..|||:.::           |..|..         .|||::||:|.....| :.||.|||||..
 Worm   107 NETKNRYADV-----------PCQDQNIVLVAKPPAPSDYVHANFVGCPMVPDKRFICTQGPLDH 160

  Fly  1351 TRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWP------------------NDTVPVFYGDI 1397
            |.||||.|..:.....||||.:..|.|:.||.||||                  :.|.|: ..|.
 Worm   161 TVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQYWPLAMGEKKEVKGGIVVENVSGTKPM-DRDA 224

  Fly  1398 KVQILNDSHYADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQR 1462
            ::||           |...:..|.::..:||.|::.|||.|||....|.:..:.|.|    ..:.
 Worm   225 EIQI-----------TTLQVSFGDQKMSVRHLHWSDWPDRGVPPCKLTSLELLSAVR----GSRV 274

  Fly  1463 PIVVHCSAGVGRSGTFITLDRILQQI-NTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLL- 1525
            |||||||||:||:||.:.::.||::| .......:..:|.::|.:|.:.:||:.||:.||:.:| 
 Worm   275 PIVVHCSAGIGRTGTIVAIEYILERIAENKQCPPMPDLVKSLRDQRAYSIQTDMQYLYIHRVMLN 339

  Fly  1526 ----------AVLEGKENIVGPAREMHDNEGYEGQ 1550
                      |.|...:|:....:.:.|.....||
 Worm   340 YFLEKYKDKYAALLNPDNVAKYTKFVKDYNFATGQ 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 82/257 (32%)
PTPc 1298..1525 CDD:238006 81/255 (32%)
C17H12.3NP_001379692.1 PTPc 77..339 CDD:214550 82/258 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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