DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptp-5.1

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_500733.2 Gene:ptp-5.1 / 177291 WormBaseID:WBGene00016053 Length:482 Species:Caenorhabditis elegans


Alignment Length:391 Identity:82/391 - (20%)
Similarity:149/391 - (38%) Gaps:92/391 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1188 PIQTDQDNTSLIVAITVPLTIILVLLVTLLFYKRRR--NNCRKT------TKDSRANDNMSLPDS 1244
            ||.|....|     :|..:..:..:|.:.:..|:.:  |:.:||      |.|:..:...|:..:
 Worm   104 PIATSVSGT-----VTSTVNAMPAILSSEVSNKQPKEVNSMKKTKGAPNSTTDTPVSHKTSITGN 163

  Fly  1245 VIEQNRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYD 1309
            ..:.....:.|.:.:...|.....||   |:.:.:| :..|:.|  .....|...|:..:....|
 Worm   164 ADKWVGEDVAKTWMDSIDLAEVKKDF---EKLQTMK-IDIDKDC--KTWKANSKLNQSEHFPALD 222

  Fly  1310 HSRFKLQPVDDDEGSDYINANYVPGHNSP--REFIVTQGPLHSTRDDFWRMCWESNSRAIVMLT- 1371
            .:..|::       ..|:|.::|   ..|  |...:.|.|:..|.:.||:..::....:|.:|. 
 Worm   223 SNLLKIE-------KGYVNISHV---EVPLGRNVHIGQFPVKDTEETFWKAVFDKRITSIDVLVG 277

  Fly  1372 ----RCFEKGREKCDQY---WPNDTVPVFYGDIKVQILNDSHYADWVMTEF---MLCRGSEQRIL 1426
                ..|.|..|....|   |.|:.        ||:     |..|.|. .|   :|..|....|:
 Worm   278 DEPIEFFPKKAEDYKNYGQMWINNR--------KVE-----HVIDEVF-RFSIEVLPHGCSNSII 328

  Fly  1427 RHFH-FTTWPDFGVPNPPQTLVRFVRAFRDRIG---------AEQRPIVV--HCSAGVGRSGTFI 1479
            .:.. |..|....||      |:...|.::.:|         |:...:::  |   |.||:|.|:
 Worm   329 CNVTVFGNWKVDSVP------VKQAIAIKEALGLNYFLLKTPADDNAMIISPH---GAGRAGYFL 384

  Fly  1480 -------TLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLEGKENIVGP 1537
                   |:|..:.:.|.:|      ||.::|.:|...|.:..||..::..||..:  |:.:..|
 Worm   385 ALAVAVHTIDTKIAEPNIAD------IVKSIRTQRPRAVDSFCQYCSLYISLLYFI--KKKVTKP 441

  Fly  1538 A 1538
            |
 Worm   442 A 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 60/284 (21%)
PTPc 1298..1525 CDD:238006 55/258 (21%)
ptp-5.1NP_500733.2 PTPc 185..432 CDD:214550 63/291 (22%)
PTPc_motif 334..432 CDD:214649 26/112 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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