DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and C02B10.6

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_500718.1 Gene:C02B10.6 / 177279 WormBaseID:WBGene00015331 Length:398 Species:Caenorhabditis elegans


Alignment Length:371 Identity:106/371 - (28%)
Similarity:161/371 - (43%) Gaps:68/371 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1220 KRRRNNCRKTTKDSRANDNMSLPDSVIEQNRPILIKNFAEHYRLMSADSDF-RFSEEFEEL-KHV 1282
            |.::.:..:..|....|.....|  ...|..||:     |.:.|.:.|... :..|||..| |:.
 Worm    56 KEKKKDDGEAAKGDPTNKTNMTP--APPQTHPIV-----EQWVLRALDVGVDKLREEFRGLAKYT 113

  Fly  1283 GRDQPCTFADLPCNR------PKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSP-RE 1340
            ..|.  |......|:      .|||:.::...|.|..||   |.....:||:||||.....| :.
 Worm   114 RPDM--TQVMFNANQSPDIAITKNRYQDVPCQDQSAVKL---DQPSPCNYIHANYVGCPMIPEKR 173

  Fly  1341 FIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWP---NDTVPVFYG------- 1395
            ||..||||..|.|:||.|..::....||||.:..|.|:.||.||||   .:.:.:..|       
 Worm   174 FICAQGPLDQTIDEFWWMVIQNKVEQIVMLCKTVEMGKLKCAQYWPAAQGEKLTLKSGCVVENVS 238

  Fly  1396 ---------DIKVQILNDSHYADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVPNPPQTLVRFVR 1451
                     :|::.:||            :...|.:...:||..:|.|||.|||....|.:..:.
 Worm   239 GSKPMERDPEIQITMLN------------LTYSGGQTMSVRHLQWTEWPDRGVPPCKLTSLELLS 291

  Fly  1452 AFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQI-NTSDYVDIFGIVYAMRKERVWMVQTEQ 1515
            |.|    ..:.|||||||||:||:||.:.::.||::| .......:..:|.|:|.:|.:.:|.:.
 Worm   292 AIR----GSKVPIVVHCSAGIGRTGTIVAIEYILEKIAENKPCPPMPELVKALRDQRAFSIQNDV 352

  Fly  1516 QYICIHQCLL-----------AVLEGKENIVGPAREMHDNEGYEGQ 1550
            ||:.||:.:|           |.|...||:....:.:.|.....||
 Worm   353 QYLFIHRVMLNYFLEKYKEKYAALLTAENVAKYDKFIKDYNAAVGQ 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 88/280 (31%)
PTPc 1298..1525 CDD:238006 80/247 (32%)
C02B10.6NP_500718.1 PTPc 101..363 CDD:214550 88/282 (31%)
PTPc 133..363 CDD:238006 80/248 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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