DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptp-3

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_001263671.1 Gene:ptp-3 / 174685 WormBaseID:WBGene00004215 Length:2248 Species:Caenorhabditis elegans


Alignment Length:2122 Identity:453/2122 - (21%)
Similarity:728/2122 - (34%) Gaps:721/2122 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RQKAVPQHRWLWSLAFLAAFTLKDVRCADL------AISIPNNPGL--------DDGASY----- 61
            |.:..|:.:.||         |:|:...|:      ::|...|||.        :|...|     
 Worm   217 RVRGDPRAKVLW---------LRDLIPLDIRADGRYSVSTIGNPGALMIQHAREEDQGKYECIAR 272

  Fly    62 ---------------RLDYSPPF------------------------GYPEP-----NTTI---- 78
                           ::...||:                        |||.|     .|.:    
 Worm   273 NTLGVAHSKAANLYVKVRRVPPYFSYKLERQYVVGVGGNINLTCVAVGYPMPRVFWKKTDLMVLD 337

  Fly    79 --ASREIGDEIQFSRALPGTKYNFWLYYTNFTHHDWLTWTVTITTAPDPPSNLSVQVRSGKNAII 141
              ::..||..:.....:..|: ||.....:...:...|.||.....|.||.|:.|...:.::.:|
 Worm   338 DPSTAPIGKNVLTLTHVESTE-NFTCVAVSALGNIEATTTVIAKELPPPPVNIVVSSVTSESVVI 401

  Fly   142 LWSPPTQ----GSYTA-FKIKVLG---------------------LSEASSSYNRTFQVNDN--- 177
            .|.||..    ..|.. :::|...                     .||..||..:|.:..:|   
 Worm   402 TWKPPKYNEAINKYVVNYRLKSENKDDAALFAKDSRAEDESDSERYSEGRSSRGKTMETLENSLV 466

  Fly   178 --------TFQHSVKELTPGATYQVQAYTIYDGKESVAYTSRNFTTKPNTPGKFIVWFR----NE 230
                    |::.:|:...|          :..|.||:...::   |||:.|....|..:    |.
 Worm   467 IDGLVAFQTYEFTVRSAGP----------VGVGLESLPVEAQ---TKPSKPATAPVSPQARSLNR 518

  Fly   231 TTLLVLWQP-PYPAGIYTHYKVSIEPPDANDSVLYVEKEGEPPGPAQAAF----KGLVPGRAYNI 290
            .::||.|.| ..|.|:.|.|||..    .||.|....:|.:........|    .||.|...|.:
 Worm   519 DSILVKWGPCEQPNGLITGYKVYY----TNDLVTTPIREWKQHDAKSDEFMTTINGLEPDSRYFV 579

  Fly   291 SVQTMSEDEIS----LPTTAQYRTVPLRPLNVTFDRDFITSNSFRVLWEAPKGISEFDKYQVSVA 351
            .|...:.:..|    |.|.|..:.:|.:|..:|...  :.|...::.|:.|...|....|.|...
 Worm   580 RVIAQNSEGDSPLSTLVTVATRQGIPGQPPMLTVKA--LDSRRMQLTWDKPLYSSPVVGYTVRYN 642

  Fly   352 TT--RRQSTVPRSNE--------PVAFFDFR----------DIAEPGKTFNVIVKTVSGKVTSWP 396
            |:  .::.|:...:|        |..::.||          :..||     :|.||::....|.|
 Worm   643 TSDGEKELTLTSPHEKHVVTGLHPDKYYYFRVAAYSDRGQGEFTEP-----MISKTIASIPLSSP 702

  Fly   397 ATGDVTLRPLPVRNLRSINDDKTNTMIITWEADPASTQD----EYRIVYHELE---TFN------ 448
                 |:......:.:|:.        |.|:.......:    .|||.|..||   |.|      
 Worm   703 -----TIVSAAATSSKSVE--------IRWKGPEQKKLNGVLTAYRINYFRLEDSKTANLESVEY 754

  Fly   449 ----GDTST--------LTTDRTRFTLESLLPGRNYSLSVQAVSKKMESNETSIFVVTRPSSPII 501
                .|:|:        :.:|.|.:.|..|||..:|.::|.|.:......|:||.||     ..:
 Worm   755 DEDMDDSSSFLDRMSVVVPSDATSYVLSDLLPYSSYEITVAASTMDGYGPESSIRVV-----KTL 814

  Fly   502 EDLKSIRMGLN----------ISWKSD--VNSKQEQYEVLYSRNGTSDLRTQKTKESRLV----- 549
            ||:.|.....|          ::|.:.  .|.....|.|...|....:...:|..:.|:|     
 Worm   815 EDVPSAPRNFNAELTSATSVKLTWDAPAAANGALLGYYVYLDRMVNGEPVVEKGSKKRIVMIRDS 879

  Fly   550 ------IKNLQPGAGYELKVFAVSHDLRSEPHAYFQAVYPNPPRNMTIETVRSNSVLVHWSPPES 608
                  :.:|.|...|..::.|.:                   ||...|.....|::....|||:
 Worm   880 SKRYFELDSLDPNTEYSFRLNAFN-------------------RNGDGEFSERKSIITQGIPPEA 925

  Fly   609 GEFTEYSIRYRTDSEQ-------QWVRLPSVRSTEADITDMTKGEKYTIQVNTVSFGVESPVPQE 666
            .|....|:    |.::       :| ::|.::..|..|      |||.:                
 Worm   926 PEIVSVSL----DRDEPPVVARIEW-KMPKMKPNETPI------EKYNL---------------- 963

  Fly   667 VNTTVPPNPVSNIIQLVDSRNITLEWPKPEGRVESYILKWWPSDNPGRVQTKNVSENKSADDLST 731
                                     |.:.:|..:||            |:.|.|    ...||||
 Worm   964 -------------------------WLRAQGYPDSY------------VKAKTV----DGTDLST 987

  Fly   732 VRVLIGELMPGVQYKFDI-----------QTTSYGILSGITSLYPRTMPL------IQSDVVVA- 778
            .   |..|..||.|  |:           |..:..|.:.:.|  |...|:      ::..:||: 
 Worm   988 T---ISGLWMGVVY--DVLLAAENREGRSQNATETIATPVGS--PDGEPIDVQYEVMKGKIVVSW 1045

  Fly   779 NGEKEDERDTITLSY-----------------TPTPQSSSKFDI-----YRFSLGDAEIRDKEKL 821
            ....|::|:....||                 .|.|.:||.|::     |.|.:..|        
 Worm  1046 RPPSEEKRNGNITSYKAILSAMDATADRYEQPVPAPSTSSTFEVNVRRAYLFKVAAA-------- 1102

  Fly   822 ANDTDRKVTFTGLVPGRLYNITVWTVSGGVASLPIQRQDRLYPEPITQLHATNITDTEISLRWDL 886
                    |..|:.|   |: .|.|::...|:|         ..|.|.:.....:::...::||.
 Worm  1103 --------TMKGIGP---YS-PVLTINPDPAAL---------VGPPTNVRVEATSNSTAVVQWDF 1146

  Fly   887 PKGEYNDFDIAYLTADNLLAQNMTT----------------RNEITISDLRPHRNYTFTVVV--- 932
            ...:.:.|.:.|:...   ...|.|                :....:|||..|:.|.|.|:.   
 Worm  1147 ESQKADSFVVKYMHEP---GNRMDTEKWKQLPVVSIDKENPKRFAVVSDLNAHKPYAFCVLAVKN 1208

  Fly   933 -RSGTES---SVLRSSSP------LSASFTTNEAVPGRVERFHPTDVQPSEINFEWSLPSSEANG 987
             |.|..|   :||.|.:|      |...:.|:.:|               ::.:|::.|.:....
 Worm  1209 NRQGPCSDPPTVLESVTPTYMVQNLRVLWKTSNSV---------------QLTWEYNGPRNVGFY 1258

  Fly   988 VIRQFSIAYTNINNLTDAGM------QDFESEEAFGVIKNLKPGETYVFKIQAKTAIGFGP-ERE 1045
            |.......|.| :.|.:..|      ||.:.:....:..||:|...|...:..:|   ..| .|:
 Worm  1259 VNHTGRKDYVN-HELQEKTMSTPGFGQDVDEKHREYLWTNLRPHMMYTIHVGVRT---LPPGARK 1319

  Fly  1046 Y--RQTMPILAPPRPATQVVPTEVYRSSSTI--QIRFRKNYFSDQNGQVRMYTIIV-----AEDD 1101
            |  ::.:.|..|..|....|| ::..||.|.  |...|....:::.|.:..|.||:     :.:|
 Worm  1320 YWPQEVVTITDPTGPPFVDVP-KLVDSSGTQPGQQMIRLTPATEEYGPISHYWIILVPANYSTED 1383

  Fly  1102 AKNASGLEM------------------PSWL----------DVQSYSVWLPYQAIDPYYPFEN-- 1136
            ..|...:|:                  ||..          |.||.|          |:|.|.  
 Worm  1384 VVNLDPIELEKATAEKRAQLARSLSVSPSKKLKRKASEVGDDSQSAS----------YHPKEKRA 1438

  Fly  1137 -----------------------RSVEDFTIGTENCDNHKIGYCNGPLKSGTTYRVKVRAFTGAD 1178
                                   |:.:.|.:|.....:   |:.|.||:....||:.:|||...|
 Worm  1439 RRATVPGAYVTARLSADRVKQQYRNNQPFIVGDSQLYD---GFTNYPLEHNLHYRLMMRAFAKND 1500

  Fly  1179 KFTDTAYS--FPIQTDQDNTSLIVAITVPLTI----------------------ILVLLVTLLF- 1218
            ..|..::.  .|:............:|.|.||                      :|..:|.:|. 
 Worm  1501 VRTKDSFEQRAPMSEKLSRMYSDSVLTEPFTIKSALRGASQKSSPWVGACIAFLVLFSIVGMLIC 1565

  Fly  1219 --------------------------------------------------------YKRRRNNCR 1227
                                                                    |::...|..
 Worm  1566 WWLRCNKKSAGRHPRHGSITKVALTGNIMNGGGGIPGETSKLLSTSNEYGRQIMNPYEQMNGNHH 1630

  Fly  1228 K---------TTKDSRANDNMSLP----------DSVIEQNRP-ILIKNFAEHYRLMSADSDFRF 1272
            .         .|..||:|....:|          :::...:.| :.|...|.|...:..:::..|
 Worm  1631 MESSMDLYPLPTSHSRSNGYAPVPVAIPSLPNNGNNMTTVSHPAVPIAELANHIERLRMNNNAGF 1695

  Fly  1273 SEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNS 1337
            ..|||.:: .|:......:....|:.|||:.|:..|||||..|..|:...|.||||||||.|::.
 Worm  1696 QSEFESIE-TGQHFTWEHSSADMNKHKNRYANVAAYDHSRVVLSNVEGYPGMDYINANYVDGYDK 1759

  Fly  1338 PREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQIL 1402
            ||.:|.|||||..|..|||||.||..|..|||||...|:.|.|||||||:..... ||||:|.:|
 Worm  1760 PRSYIATQGPLPETFSDFWRMVWEEQSVTIVMLTNLEERSRVKCDQYWPSRGTAT-YGDIEVTLL 1823

  Fly  1403 NDSHYADWVMTEFMLCRGSEQRI--LRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPIV 1465
            ...|.|.:.|....|....|..:  ::|..:|.|||.|||:.|...:.|::..:.....:..||:
 Worm  1824 ESVHLAHYTMRTMRLKMVGEPEVREIKHLQYTAWPDHGVPDHPTPFLIFLKRVKTLNPNDAGPII 1888

  Fly  1466 VHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLL-AVLE 1529
            .|||||:||:|.||.:|.:|:::...:.|||:|.|.|:|.:|.:|||||:|||.||..:| ||..
 Worm  1889 SHCSAGIGRTGAFIVIDCMLERLRYDNTVDIYGCVTALRAQRSYMVQTEEQYIFIHDAVLDAVNS 1953

  Fly  1530 GKENIVGPAREMHDNEGYEGQQVQLDENGDVVATIEGHLSHHDLQQAEAEAIDDENAAILHDDQQ 1594
            |...:  ||..:|.                       ||  |.|.|..|:.:...:....|    
 Worm  1954 GSTEV--PASRLHQ-----------------------HL--HILSQPSADQLSGIDMEFRH---- 1987

  Fly  1595 PLTS-SFTGHH---THMP---PTTSMSSF--------------GGGGGGHTN---VDA-PDRXHS 1634
             ||: .:|.:.   .::|   |...|.|.              |..|..:.|   :|. .:|...
 Worm  1988 -LTTLKWTSNRCTVANLPVNRPKNRMLSAVPYDSNRVIMRLLPGADGSDYINASWIDGYKERGAY 2051

  Fly  1635 VVNQS--------------DNNNSVVIVLV-DNKPSSMICKD 1661
            :..|:              ::|:.::.:|| .|:.....|.|
 Worm  2052 IATQAPTNETAADFWRAIWEHNSPIIAMLVRTNERGQEQCSD 2093

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 20/117 (17%)
fn3 220..304 CDD:278470 25/96 (26%)
fn3 315..391 CDD:278470 19/95 (20%)
FN3 405..494 CDD:238020 26/113 (23%)
FN3 511..574 CDD:238020 13/85 (15%)
FN3 583..671 CDD:238020 17/94 (18%)
fn3 683..753 CDD:278470 18/80 (23%)
fn3 787..850 CDD:278470 16/84 (19%)
fn3 866..935 CDD:278470 16/88 (18%)
fn3 961..1043 CDD:278470 15/88 (17%)
PTPc 1272..1525 CDD:214550 111/254 (44%)
PTPc 1298..1525 CDD:238006 105/228 (46%)
ptp-3NP_001263671.1 I-set 93..184 CDD:254352
Ig 106..185 CDD:299845
IG_like 201..287 CDD:214653 13/78 (17%)
Ig 212..288 CDD:299845 13/79 (16%)
IG_like 302..378 CDD:214653 12/76 (16%)
Ig 309..377 CDD:299845 11/68 (16%)
FN3 383..499 CDD:238020 23/128 (18%)
FN3 507..600 CDD:238020 25/96 (26%)
FN3 605..693 CDD:238020 18/94 (19%)
FN3 700..813 CDD:238020 30/130 (23%)
FN3 818..918 CDD:238020 18/118 (15%)
FN3 923..1020 CDD:238020 31/169 (18%)
FN3 1027..1116 CDD:238020 20/108 (19%)
fn3 1125..1213 CDD:278470 16/90 (18%)
PTPc 1694..1949 CDD:214550 111/256 (43%)
PTPc 1720..1949 CDD:238006 105/229 (46%)
PTPc 1980..2239 CDD:214550 20/119 (17%)
PTPc 2008..2239 CDD:238006 15/86 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3031
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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